RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 HIRAP54198 1017 aaPredicted RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 LARP1BQ659C4 914 aaKnown RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 TATDN1Q6P1N9 297 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 PGAP2Q9UHJ9 254 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 BOLA1Q9Y3E2 137 aa12.53□□□□□ -0.4
SP140-208ENST00000473711 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
SP140-208ENST00000473711 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 SNPHO15079 494 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 STX6O43752 255 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 DDAH1O94760 285 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 CALM1P0DP23 149 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 CALM2P0DP24 149 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 CALM3P0DP25 149 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
SP140-208ENST00000473711 FOSBP53539 338 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 RCAN1P53805 252 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 TROAPQ12815 778 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
SP140-208ENST00000473711 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
SP140-208ENST00000473711 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 TNPO1Q92973 898 aaKnown RBP12.52□□□□□ -0.41
SP140-208ENST00000473711 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
SP140-208ENST00000473711 MTMR7Q9Y216 660 aa12.52□□□□□ -0.41
SP140-208ENST00000473711 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 CDKL5O76039 1030 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 GDF11O95390 407 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 BRD1O95696 1058 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 TOP1P11387 765 aaKnown RBP12.51□□□□□ -0.41
SP140-208ENST00000473711 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
SP140-208ENST00000473711 NTRK3Q16288 839 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
SP140-208ENST00000473711 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 PNMA1Q8ND90 353 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 PHKBQ93100 1093 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
SP140-208ENST00000473711 ORC3Q9UBD5 711 aaPredicted RBP12.51□□□□□ -0.41
SP140-208ENST00000473711 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
SP140-208ENST00000473711 VPS37CA5D8V6 355 aaPredicted RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 TBC1D12O60347 775 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 PDCP20941 246 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 NOVP48745 357 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 JAG1P78504 1218 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 SSRP1Q08945 709 aaKnown RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 SEPT2Q15019 361 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 APOBEC3FQ8IUX4 373 aaKnown RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 SLC26A6Q9BXS9 759 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 CABP5Q9NP86 173 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 RBM28Q9NW13 759 aaKnown RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 KIF3AQ9Y496 699 aa12.5□□□□□ -0.41
SP140-208ENST00000473711 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
SP140-208ENST00000473711 SIPA1L1O43166 1804 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 NID2Q14112 1375 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 H3BQV1 296 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 TTLL1O95922 423 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 GH2P01242 217 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 ZSCAN22P10073 491 aaPredicted RBP12.49□□□□□ -0.41
SP140-208ENST00000473711 IFNAR1P17181 557 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 GUCY1A2P33402 732 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 PRAMEF18Q5VWM3 479 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 LRRC47Q8N1G4 583 aaKnown RBP12.49□□□□□ -0.41
SP140-208ENST00000473711 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 GGA3Q9NZ52 723 aa12.49□□□□□ -0.41
SP140-208ENST00000473711 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
SP140-208ENST00000473711 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
SP140-208ENST00000473711 KIF5BP33176 963 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 MAP3K10Q02779 954 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 GRM4Q14833 912 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
SP140-208ENST00000473711 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 STAG2Q8N3U4 1231 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
SP140-208ENST00000473711 MAP3K14Q99558 947 aa12.48□□□□□ -0.41
SP140-208ENST00000473711 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
SP140-208ENST00000473711 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms