RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ADORA2AP29274 412 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 EPHB4P54760 987 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 CCNA1P78396 465 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 GABPAQ06546 454 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 SLFNL1Q499Z3 407 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 SIAH1Q8IUQ4 282 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 SLC44A5Q8NCS7 719 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 FERMT2Q96AC1 680 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 SEMA6BQ9H3T3 888 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
TRAF4-209ENST00000473421 SMCHD1A6NHR9 2005 aa15.39■□□□□ 0.05
TRAF4-209ENST00000473421 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-209ENST00000473421 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
TRAF4-209ENST00000473421 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
TRAF4-209ENST00000473421 GLRX3O76003 335 aaKnown RBP15.38■□□□□ 0.05
TRAF4-209ENST00000473421 ERCC3P19447 782 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 ADCYAP1R1P41586 468 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 USP14P54578 494 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 DPP9Q86TI2 863 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 MYLIPQ8WY64 445 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 PRDM5Q9NQX1 630 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-209ENST00000473421 PDLIM7Q9NR12 457 aa15.38■□□□□ 0.05
TRAF4-209ENST00000473421 COG2Q14746 738 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 SNX17Q15036 470 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 FAM47AQ5JRC9 791 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 ZNF697Q5TEC3 545 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 TTC6Q86TZ1 520 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 SPATC1LQ9H0A9 340 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
TRAF4-209ENST00000473421 MSCO60682 206 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 CHGBP05060 677 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 TAL1P17542 331 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-209ENST00000473421 LRRC41Q15345 812 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 OLFML2BQ68BL8 750 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 MAFAQ8NHW3 353 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-209ENST00000473421 SDR42E1Q8WUS8 393 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 CABP5Q9NP86 173 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 EXOC6BQ9Y2D4 811 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 ZNF236Q9UL36 1845 aa15.36■□□□□ 0.05
TRAF4-209ENST00000473421 ZNFX1Q9P2E3 1918 aaKnown RBP15.35■□□□□ 0.05
TRAF4-209ENST00000473421 MPHOSPH10O00566 681 aaKnown RBP15.35■□□□□ 0.05
TRAF4-209ENST00000473421 SEPT4O43236 478 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 POLR3DP05423 398 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-209ENST00000473421 TLE2Q04725 743 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-209ENST00000473421 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-209ENST00000473421 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 PRKAG2Q9UGJ0 569 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
TRAF4-209ENST00000473421 CYP2D7A0A087X1C5 515 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 MAGEB6P1A0A0J9YX57 407 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 PRKAB2O43741 272 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 AKR1B1P15121 316 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 PDE6AP16499 860 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 DSG3P32926 999 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 PLS1Q14651 629 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 AACSQ86V21 672 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 LCORLQ8N3X6 602 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 MAML3Q96JK9 1138 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 FBXO28Q9NVF7 368 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 HOXC10Q9NYD6 342 aa15.34■□□□□ 0.05
TRAF4-209ENST00000473421 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
TRAF4-209ENST00000473421 MUC3AQ02505 3323 aa15.33■□□□□ 0.05
TRAF4-209ENST00000473421 KBTBD13C9JR72 458 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 STRNO43815 780 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 PGK1P00558 417 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 PGK2P07205 417 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-209ENST00000473421 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 TMEM132BQ14DG7 1078 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 SHCBP1Q8NEM2 672 aa15.33■□□□□ 0.04
TRAF4-209ENST00000473421 DCP1AQ9NPI6 582 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-209ENST00000473421 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-209ENST00000473421 IGSF3O75054 1194 aa15.32■□□□□ 0.04
TRAF4-209ENST00000473421 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
TRAF4-209ENST00000473421 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
TRAF4-209ENST00000473421 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
TRAF4-209ENST00000473421 FLOT1O75955 427 aa15.31■□□□□ 0.04
TRAF4-209ENST00000473421 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
TRAF4-209ENST00000473421 ITPRIPQ8IWB1 547 aa15.31■□□□□ 0.04
TRAF4-209ENST00000473421 PHF24Q9UPV7 400 aa15.31■□□□□ 0.04
TRAF4-209ENST00000473421 BAZ2AQ9UIF9 1905 aaKnown RBP15.31■□□□□ 0.04
TRAF4-209ENST00000473421 GOLIM4O00461 696 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 GRIN2CQ14957 1233 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 TTC28Q96AY4 2481 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 BCL11AQ9H165 835 aa15.3■□□□□ 0.04
TRAF4-209ENST00000473421 MROH8Q9H579 483 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms