RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 NOVP48745 357 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 HAND2P61296 217 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 SP3Q02447 781 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 FAM110CQ1W6H9 321 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 SHROOM1Q2M3G4 852 aaPredicted RBP10.1□□□□□ -0.79
SSBP1-208ENST00000469123 LBX2Q6XYB7 198 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 CCDC84Q86UT8 332 aaPredicted RBP10.1□□□□□ -0.79
SSBP1-208ENST00000469123 MB21D1Q8N884 522 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 ACER1Q8TDN7 264 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 CEP95Q96GE4 821 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 MTA3Q9BTC8 594 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP1-208ENST00000469123 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 EMILIN3Q9NT22 766 aa10.1□□□□□ -0.79
SSBP1-208ENST00000469123 ADGRA2Q96PE1 1338 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 A0A1W2PRG0 241 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 TREML2Q5T2D2 321 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 RCSD1Q6JBY9 416 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 C17orf99Q6UX52 265 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 CATSPERGQ6ZRH7 1159 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 CTU1Q7Z7A3 348 aaKnown RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 DGKHQ86XP1 1220 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 TBC1D10CQ8IV04 446 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 ZNF296Q8WUU4 475 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 ASCC2Q9H1I8 757 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 IL25Q9H293 177 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 HOXC10Q9NYD6 342 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 CLIP2Q9UDT6 1046 aa10.09□□□□□ -0.79
SSBP1-208ENST00000469123 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
SSBP1-208ENST00000469123 FDX1P10109 184 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 BCRP11274 1271 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 TOP1P11387 765 aaKnown RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 HOXD10P28358 340 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 PRMT2P55345 433 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 HERVK_113P62684 666 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 CCNA1P78396 465 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 PTH1RQ03431 593 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 KRT32Q14532 448 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 COG2Q14746 738 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 ZYXQ15942 572 aaKnown RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 FAM47AQ5JRC9 791 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 SIAH1Q8IUQ4 282 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 NCOA7Q8NI08 942 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 NBPF3Q9H094 633 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 RPAP3Q9H6T3 665 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-208ENST00000469123 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 RABGAP1Q9Y3P9 1069 aa10.08□□□□□ -0.8
SSBP1-208ENST00000469123 ERICH2A1L162 156 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 F5H6K3 240 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 PLA2G6O60733 806 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 CYP21A2P08686 494 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 CYP2C8P10632 490 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 COPB2P35606 906 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 FCGRTP55899 365 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
SSBP1-208ENST00000469123 KLRC3Q07444 240 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 TSGA10IPQ3SY00 556 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 GPRC5AQ8NFJ5 357 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 TANGO6Q9C0B7 1094 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 NEDD4P46934 1319 aa10.07□□□□□ -0.8
SSBP1-208ENST00000469123 MGAMO43451 1857 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 PARP14Q460N5 1801 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 KDM4AO75164 1064 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 FLOT1O75955 427 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 NDUFB10O96000 172 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 SLC1A4P43007 532 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 NECTIN1Q15223 517 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 SLFN13Q68D06 897 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 CPA4Q9UI42 421 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 FEM1BQ9UK73 627 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
SSBP1-208ENST00000469123 RLFQ13129 1914 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
SSBP1-208ENST00000469123 B4E1Z4 1266 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 E7EWF7 191 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 RAD21O60216 631 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
SSBP1-208ENST00000469123 BMP3P12645 472 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 MCCP23508 829 aa10.05□□□□□ -0.8
SSBP1-208ENST00000469123 MAPK4P31152 587 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms