RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
BRAT1-203ENST00000467558 TAX1BP1Q86VP1 789 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 TRIML1Q8N9V2 468 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 CTNNBL1Q8WYA6 563 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-203ENST00000467558 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 FRMD4BQ9Y2L6 1034 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 AFF2P51816 1311 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
BRAT1-203ENST00000467558 TUBB4BP68371 445 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 SP4Q02446 784 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 BMS1Q14692 1282 aaKnown RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 KRBA2Q6ZNG9 492 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 CEP112Q8N8E3 955 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 GPKOWQ92917 476 aaPredicted RBP eCLIP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 ARHGEF35A5YM69 484 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 PLA2G12BQ9BX93 195 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 SNAP23O00161 211 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 KCNQ2O43526 872 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 PPP6R2O75170 966 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 MYCNP04198 464 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 NPR1P16066 1061 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 PRPHP41219 470 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 NDUFA8P51970 172 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 KIF23Q02241 960 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 KARSQ15046 597 aaKnown RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 PTGDRQ13258 359 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 SYT10Q6XYQ8 523 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 DRC1Q96MC2 740 aa15.44■□□□□ 0.06
BRAT1-203ENST00000467558 FRMPD2Q68DX3 1309 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-203ENST00000467558 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-203ENST00000467558 SLFN13Q68D06 897 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 DYMQ7RTS9 669 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 GSTTP1A0A1W2PQM5 241 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 OR52Z1P0C646 297 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-203ENST00000467558 DIXDC1Q155Q3 683 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 CC2D2BQ6DHV5 1058 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 SELENOOQ9BVL4 669 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
BRAT1-203ENST00000467558 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 SMTNP53814 917 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 ASPRV1Q53RT3 343 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 NUP58Q9BVL2 599 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
BRAT1-203ENST00000467558 IFFO1Q0D2I5 559 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ZNF569Q5MCW4 686 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 KIFC2Q96AC6 838 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 CLIC6Q96NY7 704 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 BLZF1Q9H2G9 400 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 GOLGA6L10A0A0M3HER8 536 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 CTNNA2P26232 953 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 GAS2L3Q86XJ1 694 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
BRAT1-203ENST00000467558 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 PCDHA12Q9UN75 941 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 MRVI1Q9Y6F6 885 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 JCADQ9P266 1359 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 KDM3AQ9Y4C1 1321 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 TCP10L2B9ZVM9 353 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 KIAA0754O94854 1291 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 TBC1D9BQ66K14 1250 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ARHGEF1Q92888 912 aaKnown RBP15.42■□□□□ 0.06
BRAT1-203ENST00000467558 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ANKRD62A6NC57 917 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 ARHGAP6O43182 974 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 MMP10P09238 476 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 LONP1P36776 959 aaKnown RBP15.42■□□□□ 0.06
BRAT1-203ENST00000467558 FBXO11Q86XK2 927 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 TRMT44Q8IYL2 757 aaKnown RBP15.42■□□□□ 0.06
BRAT1-203ENST00000467558 LINC00301Q8NCQ3 95 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
BRAT1-203ENST00000467558 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 TTLL1O95922 423 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 TOB2Q14106 344 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 CCDC84Q86UT8 332 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 XPO4Q9C0E2 1151 aaKnown RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 DBNDD1Q9H9R9 158 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-203ENST00000467558 NEBLO76041 1014 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 MMP1P03956 469 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 CBX1P83916 185 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 VWA3BQ502W6 1294 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 CCDC122Q5T0U0 273 aa15.41■□□□□ 0.06
BRAT1-203ENST00000467558 CYP2D7A0A087X1C5 515 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms