RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 HOXC6P09630 235 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 CNGA1P29973 690 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 HOXC10Q9NYD6 342 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 FLRT1Q9NZU1 646 aa17.16■□□□□ 0.34
ATG4B-214ENST00000465399 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 EVX2Q03828 476 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
ATG4B-214ENST00000465399 GPR153Q6NV75 609 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 AMOTL1Q8IY63 956 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 UBE2OQ9C0C9 1292 aaKnown RBP17.15■□□□□ 0.34
ATG4B-214ENST00000465399 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■□□□ 13.4
ATG4B-214ENST00000465399 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
ATG4B-214ENST00000465399 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 PAG1Q9NWQ8 432 aa17.15■□□□□ 0.34
ATG4B-214ENST00000465399 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
ATG4B-214ENST00000465399 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 CYP2D6P10635 497 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 LRIT3Q3SXY7 679 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 NPLOC4Q8TAT6 608 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 LPAR1Q92633 364 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 MOV10L1Q9BXT6 1211 aaKnown RBP17.14■□□□□ 0.33
ATG4B-214ENST00000465399 SPATC1LQ9H0A9 340 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
ATG4B-214ENST00000465399 STRNO43815 780 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 MBD4O95243 580 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 ADORA2AP29274 412 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 CYP2C19P33261 490 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 ADD2P35612 726 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 ICA1Q05084 483 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 SENP6Q9GZR1 1112 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-214ENST00000465399 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
ATG4B-214ENST00000465399 DNM1LO00429 736 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 FLOT1O75955 427 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 ATP5JP18859 108 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 MROH8Q9H579 483 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
ATG4B-214ENST00000465399 CYBAP13498 195 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 AKR1B1P15121 316 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 ERCC3P19447 782 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 PLS1Q14651 629 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 OLFML2BQ68BL8 750 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 SPICE1Q8N0Z3 855 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 SLC17A8Q8NDX2 589 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 HAUS7Q99871 368 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
ATG4B-214ENST00000465399 PRKAB2O43741 272 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 DSG3P32926 999 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-214ENST00000465399 KIAA1755Q5JYT7 1200 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 NCAPG2Q86XI2 1143 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 DEFB123Q8N688 67 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 LBHD1Q9BQE6 289 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-214ENST00000465399 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 COL6A3P12111 3177 aa17.1■□□□□ 0.33
ATG4B-214ENST00000465399 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
ATG4B-214ENST00000465399 IGHA2P01877 340 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 CDK8P49336 464 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 ATN1P54259 1190 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-214ENST00000465399 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-214ENST00000465399 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 SLC4A4Q9Y6R1 1079 aa17.09■□□□□ 0.33
ATG4B-214ENST00000465399 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-214ENST00000465399 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
ATG4B-214ENST00000465399 MYH4Q9Y623 1939 aa17.08■□□□□ 0.33
ATG4B-214ENST00000465399 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 KBTBD13C9JR72 458 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 USP17L21D6R901 530 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 SIAH1Q8IUQ4 282 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 GOPCQ9HD26 462 aa17.08■□□□□ 0.32
ATG4B-214ENST00000465399 SEPT4O43236 478 aa17.07■□□□□ 0.32
ATG4B-214ENST00000465399 COBLO75128 1261 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms