RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 GPR162Q16538 588 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 JDP2Q8WYK2 163 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 PPP1R12CQ9BZL4 782 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 LZTFL1Q9NQ48 299 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 RNF216Q9NWF9 866 aaPredicted RBP10.89□□□□□ -0.67
UFD1-205ENST00000459854 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 H7C1W4 665 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
UFD1-205ENST00000459854 PPP4R3AQ6IN85 833 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 GBP7Q8N8V2 638 aaPredicted RBP10.89□□□□□ -0.67
UFD1-205ENST00000459854 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 RRP15Q9Y3B9 282 aaKnown RBP10.89□□□□□ -0.67
UFD1-205ENST00000459854 TTC41PQ6P2S7 1318 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
UFD1-205ENST00000459854 IFT81Q8WYA0 676 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 PARP2Q9UGN5 583 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 GUCY1B3Q02153 619 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 VSIG1Q86XK7 387 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 NEK11Q8NG66 645 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 CNNM2Q9H8M5 875 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 JRKLQ9Y4A0 524 aa10.89□□□□□ -0.67
UFD1-205ENST00000459854 EYA2O00167 538 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 EVI5O60447 810 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 RNF40O75150 1001 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 IDEP14735 1019 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 DPP8Q6V1X1 898 aaPredicted RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 SMIM5Q71RC9 77 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 MIER3Q7Z3K6 550 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 UBLCP1Q8WVY7 318 aaPredicted RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 ACTR5Q9H9F9 607 aaPredicted RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 PDE1AP54750 535 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 TPD52P55327 224 aaPredicted RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 DALRD3Q5D0E6 543 aaKnown RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 CEP85Q6P2H3 762 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 KCNK9Q9NPC2 374 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 CETN3O15182 167 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 KRT13P13646 458 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 ATP2B3Q16720 1220 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 ZNF804AQ7Z570 1209 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 PNMA8AQ86V59 439 aaPredicted RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 CCHCR1Q8TD31 782 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 FERMT2Q96AC1 680 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 GGA1Q9UJY5 639 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 UTP11Q9Y3A2 253 aaKnown RBP10.88□□□□□ -0.67
UFD1-205ENST00000459854 ADCY9O60503 1353 aa10.88□□□□□ -0.67
UFD1-205ENST00000459854 MACROD2A1Z1Q3 448 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 STAT6P42226 847 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 KRT23Q9C075 422 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 RFC1P35251 1148 aaPredicted RBP10.87□□□□□ -0.67
UFD1-205ENST00000459854 MLKLQ8NB16 471 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 RABGGTAQ92696 567 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 ZMAT2Q96NC0 199 aaKnown RBP10.87□□□□□ -0.67
UFD1-205ENST00000459854 BOLA2Q9H3K6 86 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 LRP2BPQ9P2M1 347 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 CDC25BP30305 580 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
UFD1-205ENST00000459854 BAIAP2L1Q9UHR4 511 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 ZWINTO95229 277 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 UQCRFS1P1P0C7P4 283 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 UBXN1Q04323 297 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 TRAF1Q13077 416 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 CAPZA3Q96KX2 299 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 PNPLA7Q6ZV29 1317 aa10.87□□□□□ -0.67
UFD1-205ENST00000459854 DNAJC8O75937 253 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 CCT2P78371 535 aaKnown RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 MUM1Q2TAK8 710 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 LRRC23Q53EV4 343 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 SEL1L2Q5TEA6 688 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 GKAP1Q5VSY0 366 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 ICE2Q659A1 982 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 NUF2Q9BZD4 464 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 AOX1Q06278 1338 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 USP26Q9BXU7 913 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 IDH1O75874 414 aaKnown RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 POLR3DP05423 398 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 GNAQP50148 359 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 GRAPQ13588 217 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 CCDC14Q49A88 953 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 TMEM67Q5HYA8 995 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
UFD1-205ENST00000459854 MRFAP1L1Q96HT8 127 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 DOT1LQ8TEK3 1739 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 GMNNO75496 209 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms