RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ERMP1Q7Z2K6 904 aa6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 UBE2FQ969M7 185 aa6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 ADAM30Q9UKF2 790 aa6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 CNOT6Q9ULM6 557 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-212ENST00000456040 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 HK2P52789 917 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 LETMD1Q6P1Q0 360 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 HS2ST1Q7LGA3 356 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 GOLM1Q8NBJ4 401 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 SYTL4Q96C24 671 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 TMEM87BQ96K49 555 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 ZSWIM5Q9P217 1185 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 TJP2Q9UDY2 1190 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 GGT7Q9UJ14 662 aa6.33□□□□□ -1.4
R3HDM1-212ENST00000456040 SASH1O94885 1247 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 PLCG1P19174 1290 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 FAM160A1Q05DH4 1040 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 MCATQ8IVS2 390 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 XAGE3Q8WTP9 111 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 COX4I2Q96KJ9 171 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 SLC6A17Q9H1V8 727 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 COPRSQ9NQ92 184 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 TMEM59LQ9UK28 342 aa6.32□□□□□ -1.4
R3HDM1-212ENST00000456040 SEMA7AO75326 666 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 CBX7O95931 251 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 DLG4P78352 724 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 MPP2Q14168 576 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 ACSF2Q96CM8 615 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 CORINQ9Y5Q5 1042 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
R3HDM1-212ENST00000456040 RBM47A0AV96 593 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 PRR33A8MZF0 331 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 GARTP22102 1010 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 EIF4A3P38919 411 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 TRIM26Q12899 539 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 TMEM201Q5SNT2 666 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 FAM196AQ6ZSG2 479 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 OXR1Q8N573 874 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 ST14Q9Y5Y6 855 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
R3HDM1-212ENST00000456040 PRR36Q9H6K5 1346 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 DNAJC25-GNG10A0A024R161 153 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 A0A0G2JLL6 359 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 PEX10O60683 326 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 HPXP02790 462 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 ETV3P41162 512 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 KIR3DL1P43629 444 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 FBXL19Q6PCT2 694 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 REC114Q7Z4M0 266 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 MARCH10Q8NA82 808 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 FAM13CQ8NE31 585 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 CXorf38Q8TB03 319 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
R3HDM1-212ENST00000456040 GREM1O60565 184 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 RALGPS1Q5JS13 557 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 ZNF605Q86T29 641 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 KCNC2Q96PR1 638 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 BACH2Q9BYV9 841 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 RTEL1Q9NZ71 1219 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 POLR3KQ9Y2Y1 108 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-212ENST00000456040 TLR3O15455 904 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 GRIN3BO60391 1043 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 HTR3BO95264 441 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 CELA3BP08861 270 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 ZNF76P36508 570 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 ERVFC1P60507 584 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 MLECQ14165 292 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 LDLRAD1Q5T700 205 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 SLFN12Q8IYM2 578 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 FBXO27Q8NI29 283 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 CYB5D2Q8WUJ1 264 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 DHX38Q92620 1227 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 MCOLN1Q9GZU1 580 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 RNF32Q9H0A6 362 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 CWC22Q9HCG8 908 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 KCTD3Q9Y597 815 aa6.27□□□□□ -1.41
R3HDM1-212ENST00000456040 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
R3HDM1-212ENST00000456040 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
R3HDM1-212ENST00000456040 PDE6BP35913 854 aa6.26□□□□□ -1.41
R3HDM1-212ENST00000456040 PDZD8Q8NEN9 1154 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms