RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PPP4R3BQ5MIZ7 849 aa33.07■■■□□ 2.88
SMARCC1-203ENST00000454240 ASCC2Q9H1I8 757 aaPredicted RBP33.07■■■□□ 2.88
SMARCC1-203ENST00000454240 SYNPO2Q9UMS6 1093 aa33.07■■■□□ 2.88
SMARCC1-203ENST00000454240 NMT2O60551 498 aa33.06■■■□□ 2.88
SMARCC1-203ENST00000454240 NECTIN1Q15223 517 aa33.06■■■□□ 2.88
SMARCC1-203ENST00000454240 C17orf99Q6UX52 265 aa33.06■■■□□ 2.88
SMARCC1-203ENST00000454240 ZNF296Q8WUU4 475 aaPredicted RBP33.06■■■□□ 2.88
SMARCC1-203ENST00000454240 CNNM2Q9H8M5 875 aa33.06■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L15C9J2P7 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L13C9JLJ4 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L11C9JVI0 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L18D6R9N7 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L22D6RA61 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L17D6RBQ6 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L19D6RCP7 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L20D6RJB6 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 USP17L24Q0WX57 530 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 CATSPERGQ6ZRH7 1159 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 KRT23Q9C075 422 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 GOPCQ9HD26 462 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 TAF6LQ9Y6J9 622 aa33.05■■■□□ 2.88
SMARCC1-203ENST00000454240 B4E1Z4 1266 aa33.04■■■□□ 2.88
SMARCC1-203ENST00000454240 FKTNO75072 461 aa33.04■■■□□ 2.88
SMARCC1-203ENST00000454240 RPAP3Q9H6T3 665 aaPredicted RBP33.04■■■□□ 2.88
SMARCC1-203ENST00000454240 KDM4AO75164 1064 aa33.03■■■□□ 2.88
SMARCC1-203ENST00000454240 IRX3P78415 501 aaPredicted RBP33.03■■■□□ 2.88
SMARCC1-203ENST00000454240 SPICE1Q8N0Z3 855 aa33.03■■■□□ 2.88
SMARCC1-203ENST00000454240 CPA4Q9UI42 421 aa33.03■■■□□ 2.88
SMARCC1-203ENST00000454240 RLFQ13129 1914 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 F5H6K3 240 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 SP3Q02447 781 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 KLRC3Q07444 240 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 SMCR8Q8TEV9 937 aaPredicted RBP33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 P2RX7Q99572 595 aaKnown RBP33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 ZSWIM5Q9P217 1185 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 STX8Q9UNK0 236 aa33.02■■■□□ 2.88
SMARCC1-203ENST00000454240 PARP14Q460N5 1801 aa33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 E7EWF7 191 aa33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 SLC27A2O14975 620 aa33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 WDR46O15213 610 aaKnown RBP33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 BCRP11274 1271 aa33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 CREB3L3Q68CJ9 461 aa33.01■■■□□ 2.87
SMARCC1-203ENST00000454240 STOX1Q6ZVD7 989 aa33■■■□□ 2.87
SMARCC1-203ENST00000454240 LRRC47Q8N1G4 583 aaKnown RBP33■■■□□ 2.87
SMARCC1-203ENST00000454240 GMCL1P1Q8NEA9 526 aa33■■■□□ 2.87
SMARCC1-203ENST00000454240 TTC14Q96N46 770 aa33■■■□□ 2.87
SMARCC1-203ENST00000454240 NDUFB10O96000 172 aa32.99■■■□□ 2.87
SMARCC1-203ENST00000454240 GCLCP48506 637 aaPredicted RBP32.99■■■□□ 2.87
SMARCC1-203ENST00000454240 HERVK_113P62684 666 aa32.99■■■□□ 2.87
SMARCC1-203ENST00000454240 TRDNQ13061 729 aa32.99■■■□□ 2.87
SMARCC1-203ENST00000454240 RCSD1Q6JBY9 416 aa32.99■■■□□ 2.87
SMARCC1-203ENST00000454240 IQCA1Q86XH1 822 aa32.98■■■□□ 2.87
SMARCC1-203ENST00000454240 REC8O95072 547 aa32.97■■■□□ 2.87
SMARCC1-203ENST00000454240 CCDC178Q5BJE1 867 aa32.97■■■□□ 2.87
SMARCC1-203ENST00000454240 NCOA7Q8NI08 942 aa32.97■■■□□ 2.87
SMARCC1-203ENST00000454240 ZKSCAN3Q9BRR0 538 aa32.97■■■□□ 2.87
SMARCC1-203ENST00000454240 GTF3C3Q9Y5Q9 886 aa32.97■■■□□ 2.87
SMARCC1-203ENST00000454240 RAD21O60216 631 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 COG2Q14746 738 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 POTEEQ6S8J3 1075 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 DGKHQ86XP1 1220 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 TMEM47Q9BQJ4 181 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 TANGO6Q9C0B7 1094 aa32.96■■■□□ 2.87
SMARCC1-203ENST00000454240 TOP1P11387 765 aaKnown RBP32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 FAM83BQ5T0W9 1011 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 RNF20Q5VTR2 975 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 LBX2Q6XYB7 198 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 CYB5R4Q7L1T6 521 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 ANKRD13CQ8N6S4 541 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 GTF3C2Q8WUA4 911 aaPredicted RBP32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 ANKS1AQ92625 1134 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 ERO1AQ96HE7 468 aa32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 ZSCAN10Q96SZ4 725 aaPredicted RBP32.95■■■□□ 2.87
SMARCC1-203ENST00000454240 MGAMO43451 1857 aa32.95■■■□□ 2.86
SMARCC1-203ENST00000454240 FAM110CQ1W6H9 321 aa32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 SLFN13Q68D06 897 aa32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 RALYLQ86SE5 291 aaKnown RBP32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 CD99L2Q8TCZ2 262 aa32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 HOXC10Q9NYD6 342 aa32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 RBPJLQ9UBG7 517 aa32.94■■■□□ 2.86
SMARCC1-203ENST00000454240 SPDYE16A6NNV3 312 aaPredicted RBP32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 EPB41L2O43491 1005 aaKnown RBP32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 LACTBP83111 547 aaPredicted RBP32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 CAP1Q01518 475 aa32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 COL13A1Q5TAT6 717 aaPredicted RBP32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 NUP88Q99567 741 aaPredicted RBP32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 MORF4L1Q9UBU8 362 aa32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 ZSWIM8A7E2V4 1837 aa32.93■■■□□ 2.86
SMARCC1-203ENST00000454240 FLOT1O75955 427 aa32.92■■■□□ 2.86
SMARCC1-203ENST00000454240 TSGA10IPQ3SY00 556 aa32.92■■■□□ 2.86
SMARCC1-203ENST00000454240 ENAHQ8N8S7 591 aaPredicted RBP32.92■■■□□ 2.86
SMARCC1-203ENST00000454240 GMCL1Q96IK5 515 aa32.92■■■□□ 2.86
SMARCC1-203ENST00000454240 MYPNQ86TC9 1320 aa32.92■■■□□ 2.86
SMARCC1-203ENST00000454240 A0A0G2JMZ2 1700 aa32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 DSG3P32926 999 aa32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 MB21D2Q8IYB1 491 aaPredicted RBP32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 KCNB2Q92953 911 aa32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 UBAC1Q9BSL1 405 aa32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 TXNRD2Q9NNW7 524 aa32.91■■■□□ 2.86
SMARCC1-203ENST00000454240 TNKSO95271 1327 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms