RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LAPTM4AQ15012 233 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 BBS9Q3SYG4 887 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 HSP90AB2PQ58FF8 381 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CNNM4Q6P4Q7 775 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 PHACTR4Q8IZ21 702 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 ZNF507Q8TCN5 953 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC74BQ96LY2 380 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CDC6Q99741 560 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 MTFR1LQ9H019 292 aa5.77□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CST3P01034 146 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 HOXB4P17483 251 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CAP2P40123 477 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PCBP1Q15365 356 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 SF1Q15637 639 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 ANKRD39Q53RE8 183 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PRAMEF13Q5VWM6 474 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 HEATR6Q6AI08 1181 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 CHSY3Q70JA7 882 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 FGD2Q7Z6J4 655 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 SCLYQ96I15 445 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 COL25A1Q9BXS0 654 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 GSX1Q9H4S2 264 aaPredicted RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 NSFL1CQ9UNZ2 370 aaKnown RBP5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
HMGN3P1-201ENST00000453847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 BLACEA4D250 179 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 MEGF11A6BM72 1044 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 SHISA8B8ZZ34 492 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 AGRPO00253 132 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 DLX3O60479 287 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 ALDH1L1O75891 902 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 POU3F2P20265 443 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 PMLP29590 882 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 GBP1P32455 592 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 CYP4F3Q08477 520 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 LRRC41Q15345 812 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NTRK3Q16288 839 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 NBPF12Q5TAG4 269 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 GSTCDQ8NEC7 633 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 CYB5D2Q8WUJ1 264 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 EDARADDQ8WWZ3 215 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 ISL2Q96A47 359 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 SLC52A2Q9HAB3 445 aa5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 INTS7Q9NVH2 962 aaKnown RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 MAGEC2Q9UBF1 373 aaPredicted RBP5.75□□□□□ -1.49
HMGN3P1-201ENST00000453847 KRBA1A5PL33 1030 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ALG1L2C9J202 215 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 H3BM21 787 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 KATNA1O75449 491 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CLEC3AO75596 197 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 VSIG8P0DPA2 414 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 DRD2P14416 443 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CD247P20963 164 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TBX4P57082 545 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 SUMO1P63165 101 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ZNF460Q14592 562 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TTF1Q15361 905 aaPredicted RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 MAP4K3Q8IVH8 894 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ARHGEF39Q8N4T4 335 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 GALNT6Q8NCL4 622 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 BVESQ8NE79 360 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 DNAJB8Q8NHS0 232 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 ASPSCR1Q9BZE9 553 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM8Q9BZR9 551 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 NXF1Q9UBU9 619 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 EMC9Q9Y3B6 208 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
HMGN3P1-201ENST00000453847 LOC102724159A0A0B4J2E5 919 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ADH5P11766 374 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 SRSF11Q05519 484 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 MCL1Q07820 350 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 PWP2Q15269 919 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 DDX46Q7L014 1031 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 CCDC144CPQ8IYA2 1237 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ATL2Q8NHH9 583 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 RIN3Q8TB24 985 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 LEO1Q8WVC0 666 aaPredicted RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BTN2A2Q8WVV5 523 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 BRF1Q92994 677 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 RCC1LQ96I51 464 aaKnown RBP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 C8orf48Q96LL4 319 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 GP6Q9HCN6 339 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 MCM8Q9UJA3 840 aa5.73□□□□□ -1.49
HMGN3P1-201ENST00000453847 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms