RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 SH2D4AQ9H788 454 aa23.19■■□□□ 1.3
RAP1B-208ENST00000453560 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 RASA1P20936 1047 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 GJA8P48165 433 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 TDO2P48775 406 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 IFNL3Q8IZI9 196 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.18■■□□□ 1.3
RAP1B-208ENST00000453560 LNPKQ9C0E8 428 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 VCPKMTQ9H867 229 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 KANSL2Q9H9L4 492 aa23.18■■□□□ 1.3
RAP1B-208ENST00000453560 IGHDP01880 384 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 APPP05067 770 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
RAP1B-208ENST00000453560 PRPF38BQ5VTL8 546 aaKnown RBP23.17■■□□□ 1.3
RAP1B-208ENST00000453560 GPR142Q7Z601 462 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 SOCS4Q8WXH5 440 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 BTBD7Q9P203 1132 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
RAP1B-208ENST00000453560 MYH4Q9Y623 1939 aa23.17■■□□□ 1.3
RAP1B-208ENST00000453560 HMGCRP04035 888 aa23.16■■□□□ 1.3
RAP1B-208ENST00000453560 COG2Q14746 738 aa23.16■■□□□ 1.3
RAP1B-208ENST00000453560 USP6NLQ92738 828 aa23.16■■□□□ 1.3
RAP1B-208ENST00000453560 NUDT12Q9BQG2 462 aa23.16■■□□□ 1.3
RAP1B-208ENST00000453560 TANGO6Q9C0B7 1094 aa23.16■■□□□ 1.3
RAP1B-208ENST00000453560 COL11A1P12107 1806 aaPredicted RBP23.16■■□□□ 1.3
RAP1B-208ENST00000453560 FOXP2O15409 715 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 CCNA1P78396 465 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 MORN1Q5T089 497 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 PLEKHH3Q7Z736 793 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 CCAR1Q8IX12 1150 aaKnown RBP23.15■■□□□ 1.3
RAP1B-208ENST00000453560 SPICE1Q8N0Z3 855 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 NACAP1Q9BZK3 213 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
RAP1B-208ENST00000453560 PAK6Q9NQU5 681 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-208ENST00000453560 WDR46O15213 610 aaKnown RBP23.14■■□□□ 1.29
RAP1B-208ENST00000453560 XRCC5P13010 732 aaKnown RBP23.14■■□□□ 1.29
RAP1B-208ENST00000453560 NUCB1Q02818 461 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
RAP1B-208ENST00000453560 TRIB2Q92519 343 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 ZNF236Q9UL36 1845 aa23.14■■□□□ 1.29
RAP1B-208ENST00000453560 CYP2B6P20813 491 aa23.13■■□□□ 1.29
RAP1B-208ENST00000453560 CCDC129Q6ZRS4 1044 aa23.13■■□□□ 1.29
RAP1B-208ENST00000453560 TICAM2Q86XR7 235 aa23.13■■□□□ 1.29
RAP1B-208ENST00000453560 NAPBQ9H115 298 aa23.13■■□□□ 1.29
RAP1B-208ENST00000453560 SGPL1O95470 568 aa23.12■■□□□ 1.29
RAP1B-208ENST00000453560 ATP2B2Q01814 1243 aa23.12■■□□□ 1.29
RAP1B-208ENST00000453560 UBE2Q1Q7Z7E8 422 aa23.12■■□□□ 1.29
RAP1B-208ENST00000453560 ZNF287Q9HBT7 754 aa23.12■■□□□ 1.29
RAP1B-208ENST00000453560 GOPCQ9HD26 462 aa23.12■■□□□ 1.29
RAP1B-208ENST00000453560 IGKV6D-41A0A0C4DH26 115 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 PRDM1O75626 825 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 FLOT1O75955 427 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 DSG3P32926 999 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 TRIM32Q13049 653 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 MB21D1Q8N884 522 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 OSBPL3Q9H4L5 887 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 HELLSQ9NRZ9 838 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 NYAP2Q9P242 653 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 PLIN4Q96Q06 1357 aa23.11■■□□□ 1.29
RAP1B-208ENST00000453560 RGS2P41220 211 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 PPARAQ07869 468 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 MAP3K21Q5TCX8 1036 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 PLEKHM2Q8IWE5 1019 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 TRMT44Q8IYL2 757 aaKnown RBP23.1■■□□□ 1.29
RAP1B-208ENST00000453560 DEFB118Q96PH6 123 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 APBA2Q99767 749 aa23.1■■□□□ 1.29
RAP1B-208ENST00000453560 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.298e-42■■■■■ 28.4
RAP1B-208ENST00000453560 CWC22Q9HCG8 908 aaKnown RBP23.1■■□□□ 1.29
RAP1B-208ENST00000453560 RPTORQ8N122 1335 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 CAPN2P17655 700 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 PTPREP23469 700 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 MAP2K5Q13163 448 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
RAP1B-208ENST00000453560 ATG4CQ96DT6 458 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 FAM227BQ96M60 508 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 MOV10L1Q9BXT6 1211 aaKnown RBP23.09■■□□□ 1.29
RAP1B-208ENST00000453560 SPATC1LQ9H0A9 340 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 CRISPLD2Q9H0B8 497 aa23.09■■□□□ 1.29
RAP1B-208ENST00000453560 A0A0D9SFI3 127 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 SLC15A5A6NIM6 579 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 ZKSCAN1P17029 563 aaPredicted RBP23.08■■□□□ 1.29
RAP1B-208ENST00000453560 PDE4BQ07343 736 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 GRB14Q14449 540 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 CCL14Q16627 93 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 WDR78Q5VTH9 848 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 ADAMTS5Q9UNA0 930 aa23.08■■□□□ 1.29
RAP1B-208ENST00000453560 TRIM6-TRIM34B2RNG4 842 aa23.07■■□□□ 1.28
RAP1B-208ENST00000453560 SLC3A2P08195 630 aaKnown RBP23.07■■□□□ 1.28
RAP1B-208ENST00000453560 PRKAR2AP13861 404 aaKnown RBP23.07■■□□□ 1.28
RAP1B-208ENST00000453560 SHCBP1Q8NEM2 672 aa23.07■■□□□ 1.28
RAP1B-208ENST00000453560 CEP95Q96GE4 821 aa23.07■■□□□ 1.28
RAP1B-208ENST00000453560 HMX1Q9NP08 348 aaPredicted RBP23.07■■□□□ 1.28
RAP1B-208ENST00000453560 FBXO28Q9NVF7 368 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms