RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 NOVP48745 357 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 SEPT2Q15019 361 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
RFC4-210ENST00000449502 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
RFC4-210ENST00000449502 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
RFC4-210ENST00000449502 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 PPP2R3BQ9Y5P8 575 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
RFC4-210ENST00000449502 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
RFC4-210ENST00000449502 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 EGFRP00533 1210 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 GOLGA8HP0CJ92 632 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 DNM1Q05193 864 aaKnown RBP11.19□□□□□ -0.62
RFC4-210ENST00000449502 RESTQ13127 1097 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 SUPT20HL1Q3ZLR7 823 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 GPATCH4Q5T3I0 446 aaKnown RBP11.19□□□□□ -0.62
RFC4-210ENST00000449502 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 KRT40Q6A162 431 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 DCAF4Q8WV16 495 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
RFC4-210ENST00000449502 GINM1Q9NU53 330 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 GGA3Q9NZ52 723 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 CHD4Q14839 1912 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
RFC4-210ENST00000449502 FRMPD2Q68DX3 1309 aaPredicted RBP11.18□□□□□ -0.62
RFC4-210ENST00000449502 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
RFC4-210ENST00000449502 GOLGA6L4A6NEF3 574 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 USP17L5A8MUK1 530 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 FIBPO43427 364 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 TRAK2O60296 914 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 ASNSP08243 561 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 PDHBP11177 359 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 SCG2P13521 617 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 SMARCA1P28370 1054 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 SLC1A4P43007 532 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 NLRP5P59047 1200 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
RFC4-210ENST00000449502 ATL3Q6DD88 541 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 USP48Q86UV5 1035 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 CCDC12Q8WUD4 166 aaPredicted RBP11.18□□□□□ -0.62
RFC4-210ENST00000449502 MKL1Q969V6 931 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 AIFM3Q96NN9 605 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 FEZ1Q99689 392 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 ZNF341Q9BYN7 854 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 GOPCQ9HD26 462 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 SYNPO2Q9UMS6 1093 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
RFC4-210ENST00000449502 FER1L6Q2WGJ9 1857 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
RFC4-210ENST00000449502 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 hCG_1642624A0A1W2PR95 340 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 SOCS7O14512 581 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 CALML3P27482 149 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 KRT2P35908 639 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 CAP2P40123 477 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 ZNF543Q08ER8 600 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
RFC4-210ENST00000449502 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 STAG2Q8N3U4 1231 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
RFC4-210ENST00000449502 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
RFC4-210ENST00000449502 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
RFC4-210ENST00000449502 PITPNM2Q9BZ72 1349 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 F5H6K3 240 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 CTNND1O60716 968 aaKnown RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 MBD3O95983 291 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 MMP1P03956 469 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 NF2P35240 595 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 KLRC3Q07444 240 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 FUT2Q10981 343 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 USP50Q70EL3 339 aaPredicted RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 HOMER1Q86YM7 354 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 DIS3L2Q8IYB7 885 aaKnown RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 SPATA32Q96LK8 384 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms