RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CMA1P23946 247 aa15.18■□□□□ 0.02
SYNGAP1-204ENST00000449372 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-204ENST00000449372 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-204ENST00000449372 LPIN2Q92539 896 aa15.18■□□□□ 0.02
SYNGAP1-204ENST00000449372 PIH1D3Q9NQM4 214 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-204ENST00000449372 TUBBP07437 444 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 PHKA1P46020 1223 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 IRAK1P51617 712 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 UBASH3AP57075 661 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 KAT14Q9H8E8 782 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 SYKP43405 635 aa15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 CCNHP51946 323 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 SHOX2O60902 331 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-204ENST00000449372 A0A1B0GUA9 196 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 OTUD6BQ8N6M0 293 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 ITFG2Q969R8 447 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 PCDHA7Q9UN72 937 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 TIAM2Q8IVF5 1701 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 KIAA0754O94854 1291 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 CLNS1AP54105 237 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 WASHC4Q2M389 1173 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 BAG1Q99933 345 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 NBPF3Q9H094 633 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 CDC23Q9UJX2 597 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 FRMD3A2A2Y4 597 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 FNTAP49354 379 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 ZNF483Q8TF39 744 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 IRX2Q9BZI1 471 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 NIP7Q9Y221 180 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNGAP1-204ENST00000449372 ANKRD33BA6NCL7 494 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 TOGARAM2Q6ZUX3 1019 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 SPATA31A6Q5VVP1 1343 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 BIN1O00499 593 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 CTDNEP1O95476 244 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 FGAP02671 866 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 AARSP49588 968 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■□□□ 13.7
SYNGAP1-204ENST00000449372 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 LINC00301Q8NCQ3 95 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 BORCS6Q96GS4 357 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 CHD4Q14839 1912 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 ZNF202O95125 648 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 PTPN21Q16825 1174 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 ARMC2Q8NEN0 867 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 RIN2Q8WYP3 895 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 FTOQ9C0B1 505 aaKnown RBP eCLIP15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 ETAA1Q9NY74 926 aa15.15■□□□□ 0.02
SYNGAP1-204ENST00000449372 ADCY2Q08462 1091 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 GRIK3Q13003 919 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 MYSM1Q5VVJ2 828 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 TMEM139Q8IV31 216 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 VIPAS39Q9H9C1 493 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 SPATS2LQ9NUQ6 558 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 TTF1Q15361 905 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 WLSQ5T9L3 541 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 CEP57Q86XR8 500 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 TATDN2Q93075 761 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 CENPHQ9H3R5 247 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 RTN2O75298 545 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 PDILTQ8N807 584 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 DPF2Q92785 391 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 SH3GL3Q99963 347 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 EHD4Q9H223 541 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 CEP131Q9UPN4 1083 aa15.14■□□□□ 0.01
SYNGAP1-204ENST00000449372 SNAP23O00161 211 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 GPAA1O43292 621 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 FSBPO95073 299 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 ACTN3Q08043 901 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 NCAPHQ15003 741 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 FILIP1LQ4L180 1135 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 SLC10A5Q5PT55 438 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 KLC4Q9NSK0 619 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms