RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GTF3C2Q8WUA4 911 aaPredicted RBP16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 VCPKMTQ9H867 229 aa16.8■□□□□ 0.28
RTFDC1-204ENST00000449062 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 PRDM1O75626 825 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 FGRP09769 529 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 PPARAQ07869 468 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 COG2Q14746 738 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 MTFR1Q15390 333 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 PXYLP1Q8TE99 480 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 LPAR1Q92633 364 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 USP6NLQ92738 828 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 MKL1Q969V6 931 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 COA7Q96BR5 231 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 PORCNQ9H237 461 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 HOXC10Q9NYD6 342 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 NYAP2Q9P242 653 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
RTFDC1-204ENST00000449062 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 ADCY3O60266 1144 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 FGAP02671 866 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 NAPBQ9H115 298 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 ARHGEF10LQ9HCE6 1279 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 MKI67P46013 3256 aaKnown RBP16.78■□□□□ 0.28
RTFDC1-204ENST00000449062 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 DSG3P32926 999 aa16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 SH2D4AQ9H788 454 aa16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 MTMR4Q9NYA4 1195 aa16.77■□□□□ 0.28
RTFDC1-204ENST00000449062 MGAMO43451 1857 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 ELNP15502 786 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 MAPK4P31152 587 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 MORN1Q5T089 497 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 PAGR1Q9BTK6 254 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
RTFDC1-204ENST00000449062 RLFQ13129 1914 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 GREB1LQ9C091 1923 aaPredicted RBP16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 PDE4BQ07343 736 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 CLIP2Q9UDT6 1046 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 CEP290O15078 2479 aa16.75■□□□□ 0.27
RTFDC1-204ENST00000449062 F5H6K3 240 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 MYCP01106 439 aaPredicted RBP16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 CCL5P13501 91 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 NOVP48745 357 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 TFAP4Q01664 338 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 KLRC3Q07444 240 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 PLIN4Q96Q06 1357 aa16.74■□□□□ 0.27
RTFDC1-204ENST00000449062 ZMYM6O95789 1325 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 ORC4O43929 436 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 IGHA2P01877 340 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 GJB1P08034 283 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 SLC3A2P08195 630 aaKnown RBP16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 ATG4CQ96DT6 458 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 MOV10L1Q9BXT6 1211 aaKnown RBP16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 SYNPO2Q9UMS6 1093 aa16.73■□□□□ 0.27
RTFDC1-204ENST00000449062 FLOT1O75955 427 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 NDUFB10O96000 172 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 INHAP05111 366 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 CCNA1P78396 465 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 FAM83BQ5T0W9 1011 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 REPS2Q8NFH8 660 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 SPATC1LQ9H0A9 340 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 IL25Q9H293 177 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 GOPCQ9HD26 462 aa16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-204ENST00000449062 PLXNB2O15031 1838 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 SLC15A5A6NIM6 579 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms