RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
SMC6-206ENST00000446852 PTMAP06454 111 aaKnown RBP20.06■□□□□ 0.8
SMC6-206ENST00000446852 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
SMC6-206ENST00000446852 ZKSCAN5Q9Y2L8 839 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 WNT7AO00755 349 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 ADAMTS3O15072 1205 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 PTPREP23469 700 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 SPECC1Q5M775 1068 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 PODNQ7Z5L7 613 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 TIGD1Q96MW7 591 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 ANO10Q9NW15 660 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 STK32BQ9NY57 414 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 MTMR7Q9Y216 660 aa20.05■□□□□ 0.8
SMC6-206ENST00000446852 MSNP26038 577 aaKnown RBP20.04■□□□□ 0.8
SMC6-206ENST00000446852 CEP95Q96GE4 821 aa20.04■□□□□ 0.8
SMC6-206ENST00000446852 BRMS1Q9HCU9 246 aa20.04■□□□□ 0.8
SMC6-206ENST00000446852 USP40Q9NVE5 1235 aa20.04■□□□□ 0.8
SMC6-206ENST00000446852 CYTH3O43739 400 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 GABPAQ06546 454 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 APOBEC3HQ6NTF7 200 aaKnown RBP20.03■□□□□ 0.8
SMC6-206ENST00000446852 CDC42EP5Q6NZY7 148 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 HHIPL2Q6UWX4 724 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 TEKT1Q969V4 418 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
SMC6-206ENST00000446852 PALM3A6NDB9 673 aaPredicted RBP20.03■□□□□ 0.8
SMC6-206ENST00000446852 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.8
SMC6-206ENST00000446852 KCNH3Q9ULD8 1083 aa20.03■□□□□ 0.8
SMC6-206ENST00000446852 SIPA1L1O43166 1804 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 SRPRBQ9Y5M8 271 aaKnown RBP20.02■□□□□ 0.8
SMC6-206ENST00000446852 PLIN4Q96Q06 1357 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 ECE2O60344 883 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 GOLGA8HP0CJ92 632 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 GNAQP50148 359 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 NLRP5P59047 1200 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 DPCR1Q3MIW9 517 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 LONRF3Q496Y0 759 aa20.02■□□□□ 0.8
SMC6-206ENST00000446852 DHX40Q8IX18 779 aaKnown RBP20.02■□□□□ 0.8
SMC6-206ENST00000446852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMC6-206ENST00000446852 NOVP48745 357 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 CEP57L1Q8IYX8 460 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 CNKSR1Q969H4 720 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 GREB1LQ9C091 1923 aaPredicted RBP20.01■□□□□ 0.79
SMC6-206ENST00000446852 CRKP46108 304 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 DACT2Q5SW24 774 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 PCDHAC2Q9Y5I4 1007 aa20.01■□□□□ 0.79
SMC6-206ENST00000446852 BIN1O00499 593 aa20■□□□□ 0.79
SMC6-206ENST00000446852 NFIAQ12857 509 aa20■□□□□ 0.79
SMC6-206ENST00000446852 STRIP1Q5VSL9 837 aa20■□□□□ 0.79
SMC6-206ENST00000446852 KIAA0825Q8IV33 1275 aa20■□□□□ 0.79
SMC6-206ENST00000446852 ZNF579Q8NAF0 562 aaKnown RBP20■□□□□ 0.79
SMC6-206ENST00000446852 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
SMC6-206ENST00000446852 CPVLQ9H3G5 476 aa20■□□□□ 0.79
SMC6-206ENST00000446852 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
SMC6-206ENST00000446852 KRBA2Q6ZNG9 492 aa20■□□□□ 0.79
SMC6-206ENST00000446852 METTL16Q86W50 562 aaKnown RBP20■□□□□ 0.79
SMC6-206ENST00000446852 SH3GLB2Q9NR46 395 aa20■□□□□ 0.79
SMC6-206ENST00000446852 MYH4Q9Y623 1939 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 TOP1P11387 765 aaKnown RBP19.99■□□□□ 0.79
SMC6-206ENST00000446852 PNOCQ13519 176 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 AOC3Q16853 763 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 PIK3AP1Q6ZUJ8 805 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 USP49Q70CQ1 688 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 PLA2G4DQ86XP0 818 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 CSRNP2Q9H175 543 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 TUBE1Q9UJT0 475 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 GOLGA6L19H0YKK7 550 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 AKR1B1P15121 316 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 TTC38Q5R3I4 469 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 ZDHHC15Q96MV8 337 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 ZNF830Q96NB3 372 aaPredicted RBP19.99■□□□□ 0.79
SMC6-206ENST00000446852 SERPINB13Q9UIV8 391 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 PSME4Q14997 1843 aa19.99■□□□□ 0.79
SMC6-206ENST00000446852 ZNF75DP51815 510 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 USP17L2Q6R6M4 530 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 AOPEPQ8N6M6 819 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 SPC24Q8NBT2 197 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 CALML3P27482 149 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 NLRP12P59046 1061 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
SMC6-206ENST00000446852 ZNF174Q15697 407 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 CLEC10AQ8IUN9 316 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 BLIDQ8IZY5 108 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 CNNM3Q8NE01 707 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 SPZ1Q9BXG8 430 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 TRIM5Q9C035 493 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 NAT10Q9H0A0 1025 aaKnown RBP19.98■□□□□ 0.79
SMC6-206ENST00000446852 MTMR4Q9NYA4 1195 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 FAM13BQ9NYF5 915 aa19.98■□□□□ 0.79
SMC6-206ENST00000446852 IGKV6D-41A0A0C4DH26 115 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 FOXN1O15353 648 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
SMC6-206ENST00000446852 FKBP1AP62942 108 aaKnown RBP19.97■□□□□ 0.79
SMC6-206ENST00000446852 ZFPM1Q8IX07 1006 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms