RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 PPP2R5CQ13362 524 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 PPP2R5EQ16537 467 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 BNC2Q6ZN30 1099 aaPredicted RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 GPR155Q7Z3F1 870 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 ATCAYQ86WG3 371 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 FAM186BQ8IYM0 893 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 NEK9Q8TD19 979 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 NUP133Q8WUM0 1156 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 TTC17Q96AE7 1141 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 KATNAL1Q9BW62 490 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 TOPORSQ9NS56 1045 aaPredicted RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 LRRC4BQ9NT99 713 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 PPP1R9AQ9ULJ8 1098 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 GPSM3Q9Y4H4 160 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 AFG3L2Q9Y4W6 797 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 BHMG1C9JSJ3 638 aaPredicted RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 STXBP3O00186 592 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 CYP11A1P05108 521 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 FAM153BP0C7A2 387 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 RPS2P15880 293 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 CTNNA1P35221 906 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 SEPT6Q14141 434 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 SLC10A6Q3KNW5 377 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 C6orf132Q5T0Z8 1188 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 WWC2Q6AWC2 1192 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 ARL10Q8N8L6 244 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 ZNF296Q8WUU4 475 aaPredicted RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 AIFM3Q96NN9 605 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 KIF2CQ99661 725 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 WDR12Q9GZL7 423 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 MAN1C1Q9NR34 630 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 ZBTB21Q9ULJ3 1066 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 SLC27A2O14975 620 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 ERC2O15083 957 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 APBB3O95704 486 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 TNNT2P45379 298 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 RCAN1P53805 252 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 AK2P54819 239 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 KIAA2012Q0VF49 1180 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 GTF2H3Q13889 308 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 STAT4Q14765 748 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 DHCR24Q15392 516 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 GALNT17Q6IS24 598 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 SLITRK4Q8IW52 837 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 ELOA2Q8IYF1 753 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 CNTD1Q8N815 330 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 SSH3Q8TE77 659 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 PI4K2AQ9BTU6 479 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 ACTR10Q9NZ32 417 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 NFKBIL1Q9UBC1 381 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 PFDN2Q9UHV9 154 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 FAM50BQ9Y247 325 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 PLOD2O00469 737 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 CRKP46108 304 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 EPHA4P54764 986 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 MFSD4BQ5TF39 518 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 NUGGCQ68CJ6 796 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 GABPB2Q8TAK5 448 aaPredicted RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 CDCA7LQ96GN5 454 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 PAIP2Q9BPZ3 127 aaKnown RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 LUC7LQ9NQ29 371 aaKnown RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 DIAPH3Q9NSV4 1193 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 INTS7Q9NVH2 962 aaKnown RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 RBM28Q9NW13 759 aaKnown RBP4.59□□□□□ -1.67
UBR3-206ENST00000444475 WDR35Q9P2L0 1181 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 TMEM98Q9Y2Y6 226 aa4.59□□□□□ -1.67
UBR3-206ENST00000444475 RSF1Q96T23 1441 aaPredicted RBP4.59□□□□□ -1.68
UBR3-206ENST00000444475 PI4K2BG5E9Z4 385 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 MAP3K6O95382 1288 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 APBA3O96018 575 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 IREB2P48200 963 aaKnown RBP4.59□□□□□ -1.68
UBR3-206ENST00000444475 NAP1L1P55209 391 aaKnown RBP4.59□□□□□ -1.68
UBR3-206ENST00000444475 TMEM240Q5SV17 173 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 NUTM2GQ5VZR2 741 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 PRPF40BQ6NWY9 871 aaKnown RBP4.59□□□□□ -1.68
UBR3-206ENST00000444475 CEP68Q76N32 757 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 FNIP1Q8TF40 1166 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 CRB3Q9BUF7 120 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 TTLL2Q9BWV7 592 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 UNC45AQ9H3U1 944 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 RABL2AQ9UBK7 228 aaPredicted RBP4.59□□□□□ -1.68
UBR3-206ENST00000444475 LRFN2Q9ULH4 789 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 SQORQ9Y6N5 450 aa4.59□□□□□ -1.68
UBR3-206ENST00000444475 A0A0B4J203 849 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 ERICH4A6NGS2 130 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 PPEF1O14829 653 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 MUTP22033 750 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 HPDP32754 393 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 GRIK1P39086 918 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 NRLP54845 237 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 FIP1L1Q6UN15 594 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 LRRTM3Q86VH5 581 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 PDCD7Q8N8D1 485 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms