RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ATP2B2Q01814 1243 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 C12orf42Q96LP6 360 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 UNC93B1Q9H1C4 597 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 RBPJLQ9UBG7 517 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 MAPK4P31152 587 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 GJA8P48165 433 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 CDK8P49336 464 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 CCNA1P78396 465 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ICA1Q05084 483 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 HDAC1Q13547 482 aaPredicted RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ANKRD45Q5TZF3 282 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 CENPQQ7L2Z9 268 aaPredicted RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 U2AF1L4Q8WU68 220 aaKnown RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 APPBP2Q92624 585 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 CCDC17Q96LX7 622 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 TANGO6Q9C0B7 1094 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 SH2D4AQ9H788 454 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ARHGEF10LQ9HCE6 1279 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 ARPP21Q9UBL0 812 aaPredicted RBP10.48□□□□□ -0.73
USP6NL-203ENST00000443016 NAV1Q8NEY1 1877 aa10.48□□□□□ -0.73
USP6NL-203ENST00000443016 MX1P20591 662 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 CYP2B6P20813 491 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 Q3C1V9 767 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 CATSPERGQ6ZRH7 1159 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 SOCS4Q8WXH5 440 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 DEFB118Q96PH6 123 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
USP6NL-203ENST00000443016 FSD1Q9BTV5 496 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 MGAMO43451 1857 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 DOCK3Q8IZD9 2030 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 A0A1W2PRG0 241 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 MINDY4BA8MYZ0 360 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 HMGCRP04035 888 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 AKR1B1P15121 316 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 TDO2P48775 406 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 OTUD7AQ8TE49 926 aaPredicted RBP10.47□□□□□ -0.73
USP6NL-203ENST00000443016 OSBP2Q969R2 916 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 PORCNQ9H237 461 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 MKNK2Q9HBH9 465 aa10.47□□□□□ -0.73
USP6NL-203ENST00000443016 SMIM22K7EJ46 135 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 GPAA1O43292 621 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 TFRCP02786 760 aaKnown RBP10.46□□□□□ -0.73
USP6NL-203ENST00000443016 C16orf86Q6ZW13 317 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 CLEC10AQ8IUN9 316 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 SPICE1Q8N0Z3 855 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 HOXC10Q9NYD6 342 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 GJD2Q9UKL4 321 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
USP6NL-203ENST00000443016 SGPL1O95470 568 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 GNAT2P19087 354 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 COG2Q14746 738 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 GPR142Q7Z601 462 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 PLEKHH3Q7Z736 793 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 DPF3Q92784 378 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 GCC1Q96CN9 775 aa10.46□□□□□ -0.74
USP6NL-203ENST00000443016 RBBP6Q7Z6E9 1792 aaKnown RBP10.46□□□□□ -0.74
USP6NL-203ENST00000443016 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 PI4K2BQ8TCG2 481 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 LPAR1Q92633 364 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 SHISA4Q96DD7 197 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 NACAP1Q9BZK3 213 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 KANSL2Q9H9L4 492 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 HMX1Q9NP08 348 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-203ENST00000443016 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-203ENST00000443016 DDX60LQ5H9U9 1706 aaKnown RBP10.45□□□□□ -0.74
USP6NL-203ENST00000443016 BAZ2AQ9UIF9 1905 aaKnown RBP10.45□□□□□ -0.74
USP6NL-203ENST00000443016 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-203ENST00000443016 FLOT1O75955 427 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 RGS2P41220 211 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 ZNF287Q9HBT7 754 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 TMX2Q9Y320 296 aa10.45□□□□□ -0.74
USP6NL-203ENST00000443016 FARP2O94887 1054 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 ZKSCAN1P17029 563 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 PLS1Q14651 629 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 TRIB2Q92519 343 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 HTATIP2Q9BUP3 242 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 VCPKMTQ9H867 229 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 RPTORQ8N122 1335 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 MYH7P12883 1935 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 M0R2C6 588 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 SBK1Q52WX2 424 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
USP6NL-203ENST00000443016 ZNF444Q8N0Y2 327 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
USP6NL-203ENST00000443016 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms