RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 UBXN2AP68543 259 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 EXOSC10Q01780 885 aaKnown RBP13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 ZSCAN31Q96LW9 406 aaPredicted RBP13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 ZCCHC17Q9NP64 241 aaKnown RBP13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 GABRQQ9UN88 632 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
AC009404.1-202ENST00000439955 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 MYH1P12882 1939 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 SGPL1O95470 568 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 TFRCP02786 760 aaKnown RBP13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 CPA1P15085 419 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 AK2P54819 239 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 IDI2Q9BXS1 227 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 SH2B1Q9NRF2 756 aaPredicted RBP13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 NEDD4P46934 1319 aa13.8□□□□□ -0.2
AC009404.1-202ENST00000439955 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 ORC4O43929 436 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 ELNP15502 786 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 CTDSPL2Q05D32 466 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 PPIL2Q13356 520 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 ZMYND8Q9ULU4 1186 aaPredicted RBP13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
AC009404.1-202ENST00000439955 POLR3DP05423 398 aaPredicted RBP13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 PDE4BQ07343 736 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 CUL4AQ13619 759 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 MIGA2Q7L4E1 593 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 C7orf61Q8IZ16 206 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 ESR2Q92731 530 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
AC009404.1-202ENST00000439955 B4E1Z4 1266 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 PRC1O43663 620 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ADCY3O60266 1144 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ABCB7O75027 752 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ENTPD3O75355 529 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 INHAP05111 366 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 CYP2C8P10632 490 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 SYN1P17600 705 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 INPP5BP32019 993 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 FCGRTP55899 365 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 EVCP57679 992 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ANTXR2P58335 489 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 Q6ZUG5 572 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ANKRD23Q86SG2 305 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 INTS4Q96HW7 963 aaKnown RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 ADGRA2Q96PE1 1338 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 OSBPL5Q9H0X9 879 aaPredicted RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 DHX36Q9H2U1 1008 aaKnown RBP13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
AC009404.1-202ENST00000439955 UNC80Q8N2C7 3258 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 ATRNL1Q5VV63 1379 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 LIFRP42702 1097 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 FGD1P98174 961 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 PPATQ06203 517 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 GDF15Q99988 308 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 EHD4Q9H223 541 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 DDX4Q9NQI0 724 aaKnown RBP13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 TACC3Q9Y6A5 838 aa13.76□□□□□ -0.21
AC009404.1-202ENST00000439955 KDM4AO75164 1064 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 CYP2D6P10635 497 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 FLT3LGP49771 235 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 MOGSQ13724 837 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 CYB5R4Q7L1T6 521 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 BRF1Q92994 677 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 TCEANC2Q96MN5 208 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 ZSWIM5Q9P217 1185 aa13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
AC009404.1-202ENST00000439955 SH2B2O14492 632 aaPredicted RBP13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 GABPAQ06546 454 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 NFIAQ12857 509 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 PICALMQ13492 652 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 RRP12Q5JTH9 1297 aaKnown RBP13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 IQCA1Q86XH1 822 aa13.74□□□□□ -0.21
AC009404.1-202ENST00000439955 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms