RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
HSPG2-206ENST00000439717 CPA4Q9UI42 421 aa13.99□□□□□ -0.17
HSPG2-206ENST00000439717 TACC3Q9Y6A5 838 aa13.99□□□□□ -0.17
HSPG2-206ENST00000439717 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
HSPG2-206ENST00000439717 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
HSPG2-206ENST00000439717 BCRP11274 1271 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 PTH1RQ03431 593 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 CTU1Q7Z7A3 348 aaKnown RBP13.98□□□□□ -0.17
HSPG2-206ENST00000439717 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 RPAP3Q9H6T3 665 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-206ENST00000439717 TOMM22Q9NS69 142 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 CLIP2Q9UDT6 1046 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 LAMA4Q16363 1823 aa13.98□□□□□ -0.17
HSPG2-206ENST00000439717 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 WDR46O15213 610 aaKnown RBP13.97□□□□□ -0.17
HSPG2-206ENST00000439717 NOVP48745 357 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 HERVK_113P62684 666 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 KIF22Q14807 665 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 PKN2Q16513 984 aaKnown RBP13.97□□□□□ -0.17
HSPG2-206ENST00000439717 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
HSPG2-206ENST00000439717 CD99L2Q8TCZ2 262 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 ESR2Q92731 530 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 P2RX7Q99572 595 aaKnown RBP13.97□□□□□ -0.17
HSPG2-206ENST00000439717 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
HSPG2-206ENST00000439717 GNRH1P01148 92 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 LACTBP83111 547 aaPredicted RBP13.96□□□□□ -0.17
HSPG2-206ENST00000439717 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
HSPG2-206ENST00000439717 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 MORF4L1Q9UBU8 362 aa13.96□□□□□ -0.17
HSPG2-206ENST00000439717 NEDD4P46934 1319 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 F5H6K3 240 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 KLRC3Q07444 240 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 COG2Q14746 738 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 CCDC178Q5BJE1 867 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 SPICE1Q8N0Z3 855 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 GMCL1P1Q8NEA9 526 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 KRT23Q9C075 422 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 EFCC1Q9HA90 598 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 HOXC10Q9NYD6 342 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
HSPG2-206ENST00000439717 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
HSPG2-206ENST00000439717 MYPNQ86TC9 1320 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 NDUFB10O96000 172 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 CYP21A2P08686 494 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 OTOP1Q7RTM1 612 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 TNS4Q8IZW8 715 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 TTC14Q96N46 770 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 RABGAP1Q9Y3P9 1069 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 TRIM17Q9Y577 477 aa13.94□□□□□ -0.18
HSPG2-206ENST00000439717 RAD21O60216 631 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 NMT2O60551 498 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 KDM4AO75164 1064 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 FLOT1O75955 427 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
HSPG2-206ENST00000439717 PSMC4P43686 418 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 PRMT2P55345 433 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 FCGRTP55899 365 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 TRDNQ13061 729 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 LRRC47Q8N1G4 583 aaKnown RBP13.93□□□□□ -0.18
HSPG2-206ENST00000439717 GPRC5AQ8NFJ5 357 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 MCOLN1Q9GZU1 580 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
HSPG2-206ENST00000439717 SPDYE16A6NNV3 312 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-206ENST00000439717 B4E1Z4 1266 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 FMNL1O95466 1100 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-206ENST00000439717 HOXD10P28358 340 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 DSG3P32926 999 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 ERVK-9P63128 1117 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 ERVK-24P63145 666 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 SLFN13Q68D06 897 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 FBXO46Q6PJ61 603 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-206ENST00000439717 DGKHQ86XP1 1220 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 ARHGAP39Q9C0H5 1083 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 TXNRD2Q9NNW7 524 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 MYH4Q9Y623 1939 aa13.92□□□□□ -0.18
HSPG2-206ENST00000439717 E7EWF7 191 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 BMP3P12645 472 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 CAP1Q01518 475 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 NECTIN1Q15223 517 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 RNF20Q5VTR2 975 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 POTEEQ6S8J3 1075 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
HSPG2-206ENST00000439717 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 NKX2-3Q8TAU0 364 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 ANKS1AQ92625 1134 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 TRIM47Q96LD4 638 aa13.91□□□□□ -0.18
HSPG2-206ENST00000439717 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms