RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CASP14P31944 242 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CCT6AP40227 531 aaKnown RBP17.47■□□□□ 0.39
APP-208ENST00000439274 PBX1P40424 430 aa17.47■□□□□ 0.39
APP-208ENST00000439274 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
APP-208ENST00000439274 GPR161Q8N6U8 529 aaKnown RBP17.47■□□□□ 0.39
APP-208ENST00000439274 PARD6BQ9BYG5 372 aa17.47■□□□□ 0.39
APP-208ENST00000439274 BAZ2BQ9UIF8 2168 aaKnown RBP17.46■□□□□ 0.39
APP-208ENST00000439274 BAZ2AQ9UIF9 1905 aaKnown RBP17.46■□□□□ 0.39
APP-208ENST00000439274 NMT2O60551 498 aa17.46■□□□□ 0.39
APP-208ENST00000439274 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
APP-208ENST00000439274 TROAPQ12815 778 aa17.46■□□□□ 0.39
APP-208ENST00000439274 PTGDRQ13258 359 aa17.46■□□□□ 0.39
APP-208ENST00000439274 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
APP-208ENST00000439274 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
APP-208ENST00000439274 TTC38Q5R3I4 469 aa17.46■□□□□ 0.38
APP-208ENST00000439274 TNFRSF25Q93038 417 aa17.46■□□□□ 0.38
APP-208ENST00000439274 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
APP-208ENST00000439274 XDHP47989 1333 aa17.45■□□□□ 0.38
APP-208ENST00000439274 MFAP3LO75121 409 aa17.45■□□□□ 0.38
APP-208ENST00000439274 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
APP-208ENST00000439274 FXR1P51114 621 aaKnown RBP eCLIP17.45■□□□□ 0.38
APP-208ENST00000439274 ZNF384Q8TF68 577 aa17.45■□□□□ 0.38
APP-208ENST00000439274 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
APP-208ENST00000439274 ZCCHC17Q9NP64 241 aaKnown RBP17.45■□□□□ 0.38
APP-208ENST00000439274 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
APP-208ENST00000439274 GYPCP04921 128 aa17.45■□□□□ 0.38
APP-208ENST00000439274 ATP6V1AP38606 617 aa17.45■□□□□ 0.38
APP-208ENST00000439274 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
APP-208ENST00000439274 FERMT2Q96AC1 680 aa17.45■□□□□ 0.38
APP-208ENST00000439274 GSDMAQ96QA5 445 aa17.45■□□□□ 0.38
APP-208ENST00000439274 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
APP-208ENST00000439274 ABL1P00519 1130 aa17.44■□□□□ 0.38
APP-208ENST00000439274 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
APP-208ENST00000439274 CDC25AP30304 524 aa17.44■□□□□ 0.38
APP-208ENST00000439274 TMTC3Q6ZXV5 915 aa17.44■□□□□ 0.38
APP-208ENST00000439274 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
APP-208ENST00000439274 GOLGA1Q92805 767 aa17.44■□□□□ 0.38
APP-208ENST00000439274 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
APP-208ENST00000439274 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
APP-208ENST00000439274 CREBRFQ8IUR6 639 aa17.44■□□□□ 0.38
APP-208ENST00000439274 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
APP-208ENST00000439274 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
APP-208ENST00000439274 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
APP-208ENST00000439274 RNF225M0QZC1 329 aaPredicted RBP17.43■□□□□ 0.38
APP-208ENST00000439274 IL17AQ16552 155 aa17.43■□□□□ 0.38
APP-208ENST00000439274 FAM47AQ5JRC9 791 aa17.43■□□□□ 0.38
APP-208ENST00000439274 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
APP-208ENST00000439274 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
APP-208ENST00000439274 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
APP-208ENST00000439274 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
APP-208ENST00000439274 MTRQ99707 1265 aa17.43■□□□□ 0.38
APP-208ENST00000439274 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
APP-208ENST00000439274 CNTNAP5Q8WYK1 1306 aa17.43■□□□□ 0.38
APP-208ENST00000439274 USP17L12C9JPN9 530 aa17.43■□□□□ 0.38
APP-208ENST00000439274 USP17L21D6R901 530 aa17.43■□□□□ 0.38
APP-208ENST00000439274 CYP2C19P33261 490 aa17.43■□□□□ 0.38
APP-208ENST00000439274 MCM7P33993 719 aa17.43■□□□□ 0.38
APP-208ENST00000439274 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
APP-208ENST00000439274 ITPK1Q13572 414 aa17.43■□□□□ 0.38
APP-208ENST00000439274 KRT31Q15323 416 aa17.43■□□□□ 0.38
APP-208ENST00000439274 E2F4Q16254 413 aa17.43■□□□□ 0.38
APP-208ENST00000439274 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
APP-208ENST00000439274 PARP10Q53GL7 1025 aa17.43■□□□□ 0.38
APP-208ENST00000439274 ZNF569Q5MCW4 686 aa17.43■□□□□ 0.38
APP-208ENST00000439274 RRAGBQ5VZM2 374 aa17.43■□□□□ 0.38
APP-208ENST00000439274 VPS16Q9H269 839 aa17.43■□□□□ 0.38
APP-208ENST00000439274 RBM28Q9NW13 759 aaKnown RBP17.43■□□□□ 0.38
APP-208ENST00000439274 OAS2P29728 719 aaKnown RBP17.42■□□□□ 0.38
APP-208ENST00000439274 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
APP-208ENST00000439274 ARFGAP3Q9NP61 516 aa17.42■□□□□ 0.38
APP-208ENST00000439274 MAPK8IP1Q9UQF2 711 aa17.42■□□□□ 0.38
APP-208ENST00000439274 CACNA1SQ13698 1873 aa17.42■□□□□ 0.38
APP-208ENST00000439274 KIF5CO60282 957 aa17.42■□□□□ 0.38
APP-208ENST00000439274 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
APP-208ENST00000439274 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
APP-208ENST00000439274 CT47A1Q5JQC4 288 aaPredicted RBP17.42■□□□□ 0.38
APP-208ENST00000439274 CERKQ8TCT0 537 aa17.42■□□□□ 0.38
APP-208ENST00000439274 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
APP-208ENST00000439274 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
APP-208ENST00000439274 UBXN6Q9BZV1 441 aa17.42■□□□□ 0.38
APP-208ENST00000439274 TAB2Q9NYJ8 693 aa17.42■□□□□ 0.38
APP-208ENST00000439274 TAF1P21675 1872 aa17.41■□□□□ 0.38
APP-208ENST00000439274 TXLNAP40222 546 aa17.41■□□□□ 0.38
APP-208ENST00000439274 ERVK-24P63145 666 aa17.41■□□□□ 0.38
APP-208ENST00000439274 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
APP-208ENST00000439274 RASGRP2Q7LDG7 609 aa17.41■□□□□ 0.38
APP-208ENST00000439274 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
APP-208ENST00000439274 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
APP-208ENST00000439274 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.41■□□□□ 0.38
APP-208ENST00000439274 N4BP3O15049 544 aa17.41■□□□□ 0.38
APP-208ENST00000439274 BMP15O95972 392 aa17.41■□□□□ 0.38
APP-208ENST00000439274 KLRK1P26718 216 aa17.41■□□□□ 0.38
APP-208ENST00000439274 NLRP5P59047 1200 aa17.41■□□□□ 0.38
APP-208ENST00000439274 ST5P78524 1137 aa17.41■□□□□ 0.38
APP-208ENST00000439274 SMC1AQ14683 1233 aaKnown RBP17.41■□□□□ 0.38
APP-208ENST00000439274 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
APP-208ENST00000439274 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
APP-208ENST00000439274 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
APP-208ENST00000439274 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
APP-208ENST00000439274 FUT8Q9BYC5 575 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms