RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CCDC136Q96JN2 1154 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 EHD4Q9H223 541 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZFYVE28Q9HCC9 887 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 INCENPQ9NQS7 918 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 HELLSQ9NRZ9 838 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 ZBTB21Q9ULJ3 1066 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 KCNH4Q9UQ05 1017 aa6.9□□□□□ -1.3
HMGB3P24-201ENST00000433260 COL2A1P02458 1487 aaPredicted RBP6.9□□□□□ -1.31
HMGB3P24-201ENST00000433260 A0A0D9SFI3 127 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 FKTNO75072 461 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 PRDM1O75626 825 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 ASNSP08243 561 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 AKR1B1P15121 316 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 GNAT2P19087 354 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 PTPREP23469 700 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 ATP2B2Q01814 1243 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 CTDSPL2Q05D32 466 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 MAP2K5Q13163 448 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 MTMR2Q13614 643 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 MOGSQ13724 837 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 TREML2Q5T2D2 321 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 TTC22Q5TAA0 569 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 GPAT2Q6NUI2 795 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 NACAP1Q9BZK3 213 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 NAPBQ9H115 298 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 MKNK2Q9HBH9 465 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 LAMB1P07942 1786 aa6.89□□□□□ -1.31
HMGB3P24-201ENST00000433260 PTPRFP10586 1907 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 RAD21O60216 631 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 GSPT1P15170 499 aaKnown RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 GUCY1A2P33402 732 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 EMP3P54852 163 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 BACE1P56817 501 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 SP3Q02447 781 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 GABPAQ06546 454 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 CENPQQ7L2Z9 268 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 CLEC10AQ8IUN9 316 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZNF444Q8N0Y2 327 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 CD99L2Q8TCZ2 262 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 ACER1Q8TDN7 264 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 FEZ1Q99689 392 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 ADAM33Q9BZ11 813 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 EPB41L4AQ9HCS5 686 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 DIAPH3Q9NSV4 1193 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 TMOD4Q9NZQ9 345 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 SWAP70Q9UH65 585 aa6.88□□□□□ -1.31
HMGB3P24-201ENST00000433260 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 A0A1W2PRG0 241 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 C19orf81C9J6K1 198 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 GPR37O15354 613 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 ST18O60284 1047 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 TLR2O60603 784 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 PEX10O60683 326 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 FGAP02671 866 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 HSPD1P10809 573 aaKnown RBP6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 EEF2P13639 858 aaKnown RBP6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 PPARAQ07869 468 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 GIMAP6Q6P9H5 292 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L2Q6R6M4 530 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 C16orf86Q6ZW13 317 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZNF589Q86UQ0 364 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 P2RX7Q99572 595 aaKnown RBP6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 WDR18Q9BV38 432 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 ARHGAP39Q9C0H5 1083 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 CDHR5Q9HBB8 845 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 AGTPBP1Q9UPW5 1226 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 TRIM17Q9Y577 477 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZSWIM8A7E2V4 1837 aa6.87□□□□□ -1.31
HMGB3P24-201ENST00000433260 CCDC171Q6TFL3 1326 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 HIP1O00291 1037 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 FOXP2O15409 715 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 SLC3A2P08195 630 aaKnown RBP6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 RASA1P20936 1047 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 HAND2P61296 217 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CAP1Q01518 475 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 TFAP4Q01664 338 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 PDE4BQ07343 736 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 KIF22Q14807 665 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 C17orf99Q6UX52 265 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 TMEM179Q6ZVK1 233 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CTU1Q7Z7A3 348 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms