RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 VPS54Q9P1Q0 977 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 CLIP2Q9UDT6 1046 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 WNT10BO00744 389 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 GDF11O95390 407 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 NOVP48745 357 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 MTMR14Q8NCE2 650 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 CERKLQ49MI3 558 aaPredicted RBP25.57■■□□□ 1.68
VSX1-205ENST00000429762 USP17L2Q6R6M4 530 aa25.57■■□□□ 1.68
VSX1-205ENST00000429762 TMEM39BQ9GZU3 492 aa25.57■■□□□ 1.68
VSX1-205ENST00000429762 VEGFAP15692 232 aaPredicted RBP25.56■■□□□ 1.68
VSX1-205ENST00000429762 GNL2Q13823 731 aaKnown RBP25.56■■□□□ 1.68
VSX1-205ENST00000429762 CSPP1Q1MSJ5 1256 aa25.56■■□□□ 1.68
VSX1-205ENST00000429762 MICALL2Q8IY33 904 aa25.56■■□□□ 1.68
VSX1-205ENST00000429762 USP17L5A8MUK1 530 aa25.56■■□□□ 1.68
VSX1-205ENST00000429762 MBD3O95983 291 aa25.56■■□□□ 1.68
VSX1-205ENST00000429762 RRP1BQ14684 758 aaKnown RBP25.56■■□□□ 1.68
VSX1-205ENST00000429762 SAMD7Q7Z3H4 446 aa25.56■■□□□ 1.68
VSX1-205ENST00000429762 FOXP4Q8IVH2 680 aaPredicted RBP25.56■■□□□ 1.68
VSX1-205ENST00000429762 MYH4Q9Y623 1939 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 MMP1P03956 469 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 UBE2HP62256 183 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 JAG1P78504 1218 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 FAM151AQ8WW52 585 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 MAP3K14Q99558 947 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 SCAND2PQ9GZW5 306 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 TMEM63CQ9P1W3 806 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 ASTN2O75129 1339 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 FRMPD2Q68DX3 1309 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 COL2A1P02458 1487 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 PALM3A6NDB9 673 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 ZNF280AP59817 542 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 TBC1D10BQ4KMP7 808 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 MYSM1Q5VVJ2 828 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 TATDN1Q6P1N9 297 aa25.55■■□□□ 1.68
VSX1-205ENST00000429762 ZNF396Q96N95 335 aaPredicted RBP25.55■■□□□ 1.68
VSX1-205ENST00000429762 BTBD18B2RXH4 712 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 TTLL1O95922 423 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 BRAPQ7Z569 592 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 DIS3L2Q8IYB7 885 aaKnown RBP25.54■■□□□ 1.68
VSX1-205ENST00000429762 OXER1Q8TDS5 423 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 SYT17Q9BSW7 474 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 CLIC4Q9Y696 253 aa25.54■■□□□ 1.68
VSX1-205ENST00000429762 CYTH3O43739 400 aa25.53■■□□□ 1.68
VSX1-205ENST00000429762 MYO1BO43795 1136 aa25.53■■□□□ 1.68
VSX1-205ENST00000429762 PARP1P09874 1014 aaKnown RBP25.53■■□□□ 1.68
VSX1-205ENST00000429762 RPS12P25398 132 aaKnown RBP25.53■■□□□ 1.68
VSX1-205ENST00000429762 SEPT2Q15019 361 aa25.53■■□□□ 1.68
VSX1-205ENST00000429762 CCDC17Q96LX7 622 aa25.53■■□□□ 1.68
VSX1-205ENST00000429762 CNOT7Q9UIV1 285 aaKnown RBP25.53■■□□□ 1.68
VSX1-205ENST00000429762 CFAP45Q9UL16 551 aa25.53■■□□□ 1.68
VSX1-205ENST00000429762 METTL16Q86W50 562 aaKnown RBP25.53■■□□□ 1.68
VSX1-205ENST00000429762 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.53■■□□□ 1.68
VSX1-205ENST00000429762 KLRF2D3W0D1 207 aa25.52■■□□□ 1.68
VSX1-205ENST00000429762 NR5A1Q13285 461 aa25.52■■□□□ 1.68
VSX1-205ENST00000429762 GPKOWQ92917 476 aaPredicted RBP eCLIP25.52■■□□□ 1.68
VSX1-205ENST00000429762 PGBD1Q96JS3 809 aa25.52■■□□□ 1.68
VSX1-205ENST00000429762 ELP1O95163 1332 aa25.52■■□□□ 1.68
VSX1-205ENST00000429762 PDHBP11177 359 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 DEKP35659 375 aaKnown RBP25.51■■□□□ 1.67
VSX1-205ENST00000429762 ABCB5Q2M3G0 1257 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 SRCAPQ6ZRS2 3230 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 SCG2P13521 617 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 U2AF2P26368 475 aaKnown RBP eCLIP25.51■■□□□ 1.67
VSX1-205ENST00000429762 GNAQP50148 359 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 SAFBQ15424 915 aaKnown RBP eCLIP25.51■■□□□ 1.67
VSX1-205ENST00000429762 MIGA2Q7L4E1 593 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 RGS22Q8NE09 1264 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 UBA5Q9GZZ9 404 aa25.51■■□□□ 1.67
VSX1-205ENST00000429762 SBF1O95248 1867 aa25.5■■□□□ 1.67
VSX1-205ENST00000429762 RAD21O60216 631 aa25.5■■□□□ 1.67
VSX1-205ENST00000429762 EEF2P13639 858 aaKnown RBP25.5■■□□□ 1.67
VSX1-205ENST00000429762 YBX3P16989 372 aaKnown RBP eCLIP25.5■■□□□ 1.67
VSX1-205ENST00000429762 LMNB1P20700 586 aa25.5■■□□□ 1.67
VSX1-205ENST00000429762 PFKFB3Q16875 520 aaPredicted RBP25.5■■□□□ 1.67
VSX1-205ENST00000429762 ZSCAN23Q3MJ62 389 aa25.5■■□□□ 1.67
VSX1-205ENST00000429762 GH2P01242 217 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 PHF20Q9BVI0 1012 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 VAT1LQ9HCJ6 419 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 GPCPD1Q9NPB8 672 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 DICER1Q9UPY3 1922 aaKnown RBP25.49■■□□□ 1.67
VSX1-205ENST00000429762 DPF2Q92785 391 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 RCOR1Q9UKL0 485 aa25.49■■□□□ 1.67
VSX1-205ENST00000429762 ADAMTS3O15072 1205 aa25.48■■□□□ 1.67
VSX1-205ENST00000429762 FKBP1CQ5VVH2 108 aa25.48■■□□□ 1.67
VSX1-205ENST00000429762 SIAH1Q8IUQ4 282 aa25.48■■□□□ 1.67
VSX1-205ENST00000429762 NOSTRINQ8IVI9 506 aa25.48■■□□□ 1.67
VSX1-205ENST00000429762 RTEL1Q9NZ71 1219 aa25.48■■□□□ 1.67
VSX1-205ENST00000429762 FAM205CA6NFA0 338 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 XBP1P17861 261 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 ICA1Q05084 483 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 KIF4BQ2VIQ3 1234 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 TMEM179Q6ZVK1 233 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 FAM83AQ86UY5 434 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 HOMER1Q86YM7 354 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.47■■□□□ 1.67
VSX1-205ENST00000429762 PGAP2Q9UHJ9 254 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 HERC5Q9UII4 1024 aaKnown RBP25.47■■□□□ 1.67
VSX1-205ENST00000429762 LIG1P18858 919 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 RASA3Q14644 834 aa25.47■■□□□ 1.67
VSX1-205ENST00000429762 ATL3Q6DD88 541 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms