RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 PSMD14O00487 310 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 DALRD3Q5D0E6 543 aaKnown RBP30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 FSIP1Q8NA03 581 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 GMLQ99445 158 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 MTMR4Q9NYA4 1195 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 RAD17O75943 681 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 KRT2P35908 639 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 TCP10Q12799 353 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 MAP3K11Q16584 847 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 LZTS2Q9BRK4 669 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 TNMDQ9H2S6 317 aa30.66■■■□□ 2.5
SH3GL3-202ENST00000427482 R3HDM1Q15032 1099 aaKnown RBP30.65■■■□□ 2.5
SH3GL3-202ENST00000427482 RBM43Q6ZSC3 357 aaKnown RBP30.65■■■□□ 2.5
SH3GL3-202ENST00000427482 ENGASEQ8NFI3 743 aa30.65■■■□□ 2.5
SH3GL3-202ENST00000427482 MRPS27Q92552 414 aaKnown RBP30.65■■■□□ 2.5
SH3GL3-202ENST00000427482 PPP6R2O75170 966 aa30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 TOB1P50616 345 aaPredicted RBP30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 FAM160A1Q05DH4 1040 aa30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 CAMK4Q16566 473 aa30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 RILPL1Q5EBL4 403 aa30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 TDRD3Q9H7E2 651 aaKnown RBP30.64■■■□□ 2.5
SH3GL3-202ENST00000427482 COL2A1P02458 1487 aaPredicted RBP30.64■■■□□ 2.49
SH3GL3-202ENST00000427482 DDTLA6NHG4 134 aaPredicted RBP30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 SNW1Q13573 536 aaKnown RBP30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 NPY5RQ15761 445 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 SLC35G1Q2M3R5 365 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 AXDND1Q5T1B0 1012 aaPredicted RBP30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 NIM1KQ8IY84 436 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 ZNRF3Q9ULT6 936 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 SH3BP5LQ7L8J4 393 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 PRMT6Q96LA8 375 aaPredicted RBP30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 DNAJC18Q9H819 358 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 BRMS1Q9HCU9 246 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 PI4KBQ9UBF8 816 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 MTMR7Q9Y216 660 aa30.63■■■□□ 2.49
SH3GL3-202ENST00000427482 PARP1P09874 1014 aaKnown RBP30.62■■■□□ 2.49
SH3GL3-202ENST00000427482 JMYQ8N9B5 988 aa30.62■■■□□ 2.49
SH3GL3-202ENST00000427482 ATRNL1Q5VV63 1379 aa30.62■■■□□ 2.49
SH3GL3-202ENST00000427482 CYTH3O43739 400 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 ENTPD3O75355 529 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 RASGRP2Q7LDG7 609 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 PIBF1Q8WXW3 757 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 CCDC17Q96LX7 622 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 SGIP1Q9BQI5 828 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 SPZ1Q9BXG8 430 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 SH3GLB2Q9NR46 395 aa30.61■■■□□ 2.49
SH3GL3-202ENST00000427482 KLRF2D3W0D1 207 aa30.6■■■□□ 2.49
SH3GL3-202ENST00000427482 VEGFAP15692 232 aaPredicted RBP30.6■■■□□ 2.49
SH3GL3-202ENST00000427482 MARCKSP29966 332 aaPredicted RBP30.6■■■□□ 2.49
SH3GL3-202ENST00000427482 TNFRSF25Q93038 417 aa30.6■■■□□ 2.49
SH3GL3-202ENST00000427482 HDAC9Q9UKV0 1011 aa30.6■■■□□ 2.49
SH3GL3-202ENST00000427482 SPDYE2BA6NHP3 402 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 TTLL1O95922 423 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 SPDYE6P0CI01 402 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 GOLGA8HP0CJ92 632 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 ZSCAN29Q8IWY8 852 aaPredicted RBP30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 FMR1NBQ8N0W7 255 aaPredicted RBP30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 RNF214Q8ND24 703 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 CABP5Q9NP86 173 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 TAOK3Q9H2K8 898 aa30.59■■■□□ 2.49
SH3GL3-202ENST00000427482 A0A1B0GVL5 298 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 KINO60870 393 aaKnown RBP30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 CCDC192P0DO97 292 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 SLURP2P0DP57 97 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 CMA1P23946 247 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 SMARCA1P28370 1054 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 NLRP5P59047 1200 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 USP17L2Q6R6M4 530 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 FOXP4Q8IVH2 680 aaPredicted RBP30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 CD2APQ9Y5K6 639 aa30.58■■■□□ 2.49
SH3GL3-202ENST00000427482 CTAGE5O15320 804 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 METTL16Q86W50 562 aaKnown RBP30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 CLEC10AQ8IUN9 316 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 CKAP2LQ8IYA6 745 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 AGBL3Q8NEM8 1001 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 PPP1R1BQ9UD71 204 aaPredicted RBP30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 USP17L5A8MUK1 530 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 PDHBP11177 359 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 NDUFA8P51970 172 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 EARS2Q5JPH6 523 aaKnown RBP30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 PPP4R3BQ5MIZ7 849 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 LRRC47Q8N1G4 583 aaKnown RBP30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 OGFOD1Q8N543 542 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 CLIP2Q9UDT6 1046 aa30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 ZBTB12Q9Y330 459 aaPredicted RBP30.57■■■□□ 2.48
SH3GL3-202ENST00000427482 FAM205CA6NFA0 338 aa30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 MPHOSPH10O00566 681 aaKnown RBP30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 CALML3P27482 149 aa30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 GPKOWQ92917 476 aaPredicted RBP eCLIP30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 TMOD2Q9NZR1 351 aa30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 PCDHB6Q9Y5E3 794 aa30.56■■■□□ 2.48
SH3GL3-202ENST00000427482 FAM196BA6NMK8 535 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 CUTAO60888 179 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 SNHG28P0DPA3 235 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 EIF6P56537 245 aaKnown RBP30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 DLGAP5Q15398 846 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 TATDN1Q6P1N9 297 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 TRIM34Q9BYJ4 488 aa30.55■■■□□ 2.48
SH3GL3-202ENST00000427482 CXCL9Q07325 125 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms