RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	TSPY2	A6NKD2	308 aa		27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	CDC45	O75419	566 aa		27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	KIAA1755	Q5JYT7	1200 aa		27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	PPP4R3B	Q5MIZ7	849 aa		27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	CATSPERG	Q6ZRH7	1159 aa		27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	CTU1	Q7Z7A3	348 aa	Known RBP	27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	P2RX7	Q99572	595 aa	Known RBP	27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681		U3KPZ7	1027 aa	Predicted RBP	27.8	■■■□□ 2.04
PDGFA-205	ENST00000426681	TTLL1	O95922	423 aa		27.79	■■■□□ 2.04
PDGFA-205	ENST00000426681	MAP4K1	Q92918	833 aa		27.79	■■■□□ 2.04
PDGFA-205	ENST00000426681	RPAP3	Q9H6T3	665 aa	Predicted RBP	27.79	■■■□□ 2.04
PDGFA-205	ENST00000426681	GOPC	Q9HD26	462 aa		27.79	■■■□□ 2.04
PDGFA-205	ENST00000426681	CLIP2	Q9UDT6	1046 aa		27.79	■■■□□ 2.04
PDGFA-205	ENST00000426681	LACTB	P83111	547 aa	Predicted RBP	27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	CASC1	Q6TDU7	716 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	KIAA1211	Q6ZU35	1233 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	CD99L2	Q8TCZ2	262 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	IL17RB	Q9NRM6	502 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	TOMM22	Q9NS69	142 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	MYH4	Q9Y623	1939 aa		27.78	■■■□□ 2.04
PDGFA-205	ENST00000426681	NOV	P48745	357 aa		27.77	■■■□□ 2.04
PDGFA-205	ENST00000426681	HERVK_113	P62684	666 aa		27.77	■■■□□ 2.04
PDGFA-205	ENST00000426681	RRP12	Q5JTH9	1297 aa	Known RBP	27.77	■■■□□ 2.04
PDGFA-205	ENST00000426681	TCP11L1	Q9NUJ3	509 aa		27.77	■■■□□ 2.04
PDGFA-205	ENST00000426681	WDR46	O15213	610 aa	Known RBP	27.76	■■■□□ 2.03
PDGFA-205	ENST00000426681	CAP1	Q01518	475 aa		27.76	■■■□□ 2.03
PDGFA-205	ENST00000426681	ARHGEF6	Q15052	776 aa		27.76	■■■□□ 2.03
PDGFA-205	ENST00000426681	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.76	■■■□□ 2.03
PDGFA-205	ENST00000426681	LSG1	Q9H089	658 aa	Known RBP	27.76	■■■□□ 2.03
PDGFA-205	ENST00000426681	NEDD4	P46934	1319 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	KIF22	Q14807	665 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	PKN2	Q16513	984 aa	Known RBP	27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	FAM110C	Q1W6H9	321 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	LBX2	Q6XYB7	198 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	TNS4	Q8IZW8	715 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	SPICE1	Q8N0Z3	855 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	ANKRD13C	Q8N6S4	541 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	ESR2	Q92731	530 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681	MORF4L1	Q9UBU8	362 aa		27.75	■■■□□ 2.03
PDGFA-205	ENST00000426681		F5H6K3	240 aa		27.74	■■■□□ 2.03
PDGFA-205	ENST00000426681	NMT2	O60551	498 aa		27.74	■■■□□ 2.03
PDGFA-205	ENST00000426681	KLRC3	Q07444	240 aa		27.74	■■■□□ 2.03
PDGFA-205	ENST00000426681	GMCL1P1	Q8NEA9	526 aa		27.74	■■■□□ 2.03
PDGFA-205	ENST00000426681	GNRH1	P01148	92 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	CYP21A2	P08686	494 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	COG2	Q14746	738 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	POTEE	Q6S8J3	1075 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	OTOP1	Q7RTM1	612 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	TANGO6	Q9C0B7	1094 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	CNNM2	Q9H8M5	875 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	EFCC1	Q9HA90	598 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	HOXC10	Q9NYD6	342 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	RBPJL	Q9UBG7	517 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	RLF	Q13129	1914 aa		27.73	■■■□□ 2.03
PDGFA-205	ENST00000426681	NDUFB10	O96000	172 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	NKX2-3	Q8TAU0	364 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	KRT23	Q9C075	422 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	ARHGAP39	Q9C0H5	1083 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	MCOLN1	Q9GZU1	580 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	STX8	Q9UNK0	236 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	TRIM17	Q9Y577	477 aa		27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	RBM8A	Q9Y5S9	174 aa	Known RBP	27.72	■■■□□ 2.03
PDGFA-205	ENST00000426681	CTGF	P29279	349 aa		27.71	■■■□□ 2.03
PDGFA-205	ENST00000426681	LRRC47	Q8N1G4	583 aa	Known RBP	27.71	■■■□□ 2.03
PDGFA-205	ENST00000426681	TTC14	Q96N46	770 aa		27.71	■■■□□ 2.03
PDGFA-205	ENST00000426681	TXNRD2	Q9NNW7	524 aa		27.71	■■■□□ 2.03
PDGFA-205	ENST00000426681	MYPN	Q86TC9	1320 aa		27.7	■■■□□ 2.03
PDGFA-205	ENST00000426681	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	KDM4A	O75164	1064 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	PSMC4	P43686	418 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	GPRC5A	Q8NFJ5	357 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	TRIM47	Q96LD4	638 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	ANO2	Q9NQ90	1003 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	RABGAP1	Q9Y3P9	1069 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681	MGAM	O43451	1857 aa		27.7	■■■□□ 2.02
PDGFA-205	ENST00000426681		B4E1Z4	1266 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	RAD21	O60216	631 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	FAM83B	Q5T0W9	1011 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	ZSWIM5	Q9P217	1185 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	ZSWIM8	A7E2V4	1837 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	PARP14	Q460N5	1801 aa		27.69	■■■□□ 2.02
PDGFA-205	ENST00000426681	FLOT1	O75955	427 aa		27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	TOP1	P11387	765 aa	Known RBP	27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	DSG3	P32926	999 aa		27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	FCGRT	P55899	365 aa		27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	CCDC178	Q5BJE1	867 aa		27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	RCSD1	Q6JBY9	416 aa		27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.68	■■■□□ 2.02
PDGFA-205	ENST00000426681	CNMD	O75829	334 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	ERVK-9	P63128	1117 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	ERVK-24	P63145	666 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	NECTIN1	Q15223	517 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	SLFN13	Q68D06	897 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	IQCA1	Q86XH1	822 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	GMCL1	Q96IK5	515 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	NUP88	Q99567	741 aa	Predicted RBP	27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	ADAMTS5	Q9UNA0	930 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	PTPN22	Q9Y2R2	807 aa		27.67	■■■□□ 2.02
PDGFA-205	ENST00000426681	FMNL1	O95466	1100 aa	Predicted RBP	27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	HOXD10	P28358	340 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms