RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PGBD1Q96JS3 809 aa17.57■□□□□ 0.4
ACTB-204ENST00000425660 PHF20Q9BVI0 1012 aa17.57■□□□□ 0.4
ACTB-204ENST00000425660 TMOD2Q9NZR1 351 aa17.57■□□□□ 0.4
ACTB-204ENST00000425660 TTLL1O95922 423 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 RPS12P25398 132 aaKnown RBP17.56■□□□□ 0.4
ACTB-204ENST00000425660 SMARCA1P28370 1054 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
ACTB-204ENST00000425660 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 DIS3L2Q8IYB7 885 aaKnown RBP17.56■□□□□ 0.4
ACTB-204ENST00000425660 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 ZNF70Q9UC06 446 aaPredicted RBP17.56■□□□□ 0.4
ACTB-204ENST00000425660 BTBD18B2RXH4 712 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 SCG2P13521 617 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
ACTB-204ENST00000425660 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
ACTB-204ENST00000425660 MYH8P13535 1937 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 FZD9O00144 591 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 ZNF280AP59817 542 aaPredicted RBP17.55■□□□□ 0.4
ACTB-204ENST00000425660 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
ACTB-204ENST00000425660 FAM151AQ8WW52 585 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
ACTB-204ENST00000425660 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 CYTH3O43739 400 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 PARP1P09874 1014 aaKnown RBP17.54■□□□□ 0.4
ACTB-204ENST00000425660 PDHBP11177 359 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 PRELPP51888 382 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
ACTB-204ENST00000425660 SLC35G1Q2M3R5 365 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 GAS2L3Q86XJ1 694 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
ACTB-204ENST00000425660 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
ACTB-204ENST00000425660 CLIC4Q9Y696 253 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 hCG_1642624A0A1W2PR95 340 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 NPY5RQ15761 445 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
ACTB-204ENST00000425660 ANO1Q5XXA6 986 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 SH3GLB2Q9NR46 395 aa17.54■□□□□ 0.4
ACTB-204ENST00000425660 MYH6P13533 1939 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 CLRN2A0PK11 232 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 KLRF2D3W0D1 207 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 WNT10BO00744 389 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 RASSF7Q02833 373 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 DPF2Q92785 391 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 MKL1Q969V6 931 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 MYOZ2Q9NPC6 264 aa17.53■□□□□ 0.4
ACTB-204ENST00000425660 MYO1BO43795 1136 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 SLC39A14Q15043 492 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 RILPL1Q5EBL4 403 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 KANSL2Q9H9L4 492 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
ACTB-204ENST00000425660 SYCE3A1L190 88 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 TCP10L2B9ZVM9 353 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 LETM1O95202 739 aaPredicted RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 LIG1P18858 919 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 NR5A1Q13285 461 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 ADALQ6DHV7 355 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 USP17L2Q6R6M4 530 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 LRSAM1Q6UWE0 723 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 OXER1Q8TDS5 423 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 NYAP2Q9P242 653 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 A0A1W2PQ27 194 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 A0A1W2PQ64 194 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 A0A1W2PQD8 194 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 SPTLC2O15270 562 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 KRT2P35908 639 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 STK38Q15208 465 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 PTPAQ15257 358 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
ACTB-204ENST00000425660 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
ACTB-204ENST00000425660 TBC1D12O60347 775 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 PPP6R2O75170 966 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 ME1P48163 572 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 MRE11P49959 708 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 TOB1P50616 345 aaPredicted RBP17.5■□□□□ 0.39
ACTB-204ENST00000425660 EIF6P56537 245 aaKnown RBP17.5■□□□□ 0.39
ACTB-204ENST00000425660 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
ACTB-204ENST00000425660 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms