RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 TRIB2Q92519 343 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 GCC1Q96CN9 775 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 KANSL2Q9H9L4 492 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 ARPP21Q9UBL0 812 aaPredicted RBP11.12□□□□□ -0.63
NUP50-206ENST00000422489 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 RPTORQ8N122 1335 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 MYO5AQ9Y4I1 1855 aaKnown RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 SPDYE16A6NNV3 312 aaPredicted RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 H0YGN5 161 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 GNAT2P19087 354 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 PTPREP23469 700 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 CCL14Q16627 93 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 SBK1Q52WX2 424 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 TRMT44Q8IYL2 757 aaKnown RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
NUP50-206ENST00000422489 NACAP1Q9BZK3 213 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 IVNS1ABPQ9Y6Y0 642 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
NUP50-206ENST00000422489 SLC15A5A6NIM6 579 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 PRDM1O75626 825 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 FLOT1O75955 427 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 CACNB2Q08289 660 aaPredicted RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 MORN1Q5T089 497 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 LBX2Q6XYB7 198 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 DPP9Q86TI2 863 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 LPAR1Q92633 364 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 USP6NLQ92738 828 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 PAWRQ96IZ0 340 aaKnown RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 VCPKMTQ9H867 229 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 PAK6Q9NQU5 681 aaPredicted RBP11.1□□□□□ -0.63
NUP50-206ENST00000422489 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
NUP50-206ENST00000422489 CAPN2P17655 700 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 RASA1P20936 1047 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 CNGA1P29973 690 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 HDAC1Q13547 482 aaPredicted RBP11.09□□□□□ -0.63
NUP50-206ENST00000422489 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 APBA2Q99767 749 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 MOV10L1Q9BXT6 1211 aaKnown RBP11.09□□□□□ -0.63
NUP50-206ENST00000422489 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
NUP50-206ENST00000422489 NR2E3Q9Y5X4 410 aa11.09□□□□□ -0.63
NUP50-206ENST00000422489 WDR46O15213 610 aaKnown RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 EVI5O60447 810 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 SLC3A2P08195 630 aaKnown RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 ERCC3P19447 782 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 CCND3P30281 292 aaPredicted RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 HABP4Q5JVS0 413 aaKnown RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 ZMYM1Q5SVZ6 1142 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 CCDC129Q6ZRS4 1044 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 NECAB2Q7Z6G3 386 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 UBE2Q1Q7Z7E8 422 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 NPLOC4Q8TAT6 608 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 DIS3LQ8TF46 1054 aaKnown RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.08□□□□□ -0.64
NUP50-206ENST00000422489 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 NAPBQ9H115 298 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 EPB41L4AQ9HCS5 686 aaPredicted RBP11.08□□□□□ -0.64
NUP50-206ENST00000422489 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
NUP50-206ENST00000422489 MYH1P12882 1939 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 F5H6K3 240 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 STRNO43815 780 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 SLC34A2O95436 690 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 PDE1AP54750 535 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 TFAP4Q01664 338 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 PDE4BQ07343 736 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 KLRC3Q07444 240 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 EVI5LQ96CN4 794 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
NUP50-206ENST00000422489 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
NUP50-206ENST00000422489 MROH8Q9H579 483 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms