RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HNRNPCL1O60812 293 aaKnown RBP20.41■□□□□ 0.86
SHANK3-202ENST00000414786 GUCY2FP51841 1108 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 MMEL1Q495T6 779 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 A0A1B0GUL7 405 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 PPP2R3AQ06190 1150 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 HABP4Q5JVS0 413 aaKnown RBP20.41■□□□□ 0.86
SHANK3-202ENST00000414786 USP40Q9NVE5 1235 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 KCNJ14Q9UNX9 436 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 HAUS3Q68CZ6 603 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 CCDC87Q9NVE4 849 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 LIG4P49917 911 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 ATICP31939 592 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 ADCY1Q08828 1119 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 FGD4Q96M96 766 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 MIER3Q7Z3K6 550 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 HACD3Q9P035 362 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 ADCY7P51828 1080 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 TYW1BQ6NUM6 668 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 CLRN2A0PK11 232 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 LRRIQ4A6NIV6 560 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 ACTN4O43707 911 aaKnown RBP20.39■□□□□ 0.86
SHANK3-202ENST00000414786 S100BP04271 92 aaPredicted RBP20.39■□□□□ 0.86
SHANK3-202ENST00000414786 COBLO75128 1261 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 KIAA0825Q8IV33 1275 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 U2AF1L4Q8WU68 220 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 KSR2Q6VAB6 950 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 RSRC2Q7L4I2 434 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 P4HA1P13674 534 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 N4BP2L2Q92802 583 aaPredicted RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 OPHN1O60890 802 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 FAM207AQ9NSI2 230 aaPredicted RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 SLC5A4Q9NY91 659 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 RTEL1Q9NZ71 1219 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 SUGT1Q9Y2Z0 365 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 COG7P83436 770 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 XKR9Q5GH70 373 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PLCB1Q9NQ66 1216 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PDE1AP54750 535 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PHEXP78562 749 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC157Q569K6 752 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 GAS7O60861 476 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 LONRF2Q1L5Z9 754 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 SLC7A5P2Q9GIP4 190 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
SHANK3-202ENST00000414786 TBCCQ15814 346 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 OSTNP61366 133 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TAOK1Q7L7X3 1001 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC127Q96BQ5 260 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 VCXQ9H320 206 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 G3BP2Q9UN86 482 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 IDI1Q13907 227 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 NR1H4Q96RI1 486 aaPredicted RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 LSM14BQ9BX40 385 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 USH1CQ9Y6N9 552 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 IQCB1Q15051 598 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 SPICE1Q8N0Z3 855 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TMCO5AQ8N6Q1 288 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 ATP2A3Q93084 1043 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TMOD1P28289 359 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC13Q8IYE1 715 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 TRMT44Q8IYL2 757 aaKnown RBP20.36■□□□□ 0.85
SHANK3-202ENST00000414786 EXT2Q93063 718 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 LRWD1Q9UFC0 647 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 USP21Q9UK80 565 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 GOLGA8HP0CJ92 632 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 GNGT2O14610 69 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 BUB1O43683 1085 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 NPR1P16066 1061 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 EVCP57679 992 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 TNNC2P02585 160 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 K7ENM7 598 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 FAM180AQ6UWF9 173 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 OTUD6AQ7L8S5 288 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 NPHP3Q7Z494 1330 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 KLHL30Q0D2K2 578 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 FTOQ9C0B1 505 aaKnown RBP eCLIP20.35■□□□□ 0.85
SHANK3-202ENST00000414786 PLCD1P51178 756 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 NUCB1Q02818 461 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 BCRP11274 1271 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 CLNS1AP54105 237 aaKnown RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 RRAGAQ7L523 313 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 PEX26Q7Z412 305 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 AFAP1L1Q8TED9 768 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 FAM8A1Q9UBU6 413 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 POLGP54098 1239 aaPredicted RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 HVCN1Q96D96 273 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms