RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 USP28Q96RU2 1077 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 ZSCAN10Q96SZ4 725 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 NR1I2O75469 434 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 RUFY4Q6ZNE9 571 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 BIRC3Q13489 604 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 IFNL3Q8IZI9 196 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
SMARCA4-202ENST00000413806 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 MCTP2Q6DN12 878 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 REXO1Q8N1G1 1221 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 RNF10Q8N5U6 811 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 STX10O60499 249 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 GALNT17Q6IS24 598 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 MAP4K1Q92918 833 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 EFCC1Q9HA90 598 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 CIAO1O76071 339 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 TFAP4Q01664 338 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 CHMP2AO43633 222 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 CDC25BP30305 580 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 MTMR3Q13615 1198 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 BRD3Q15059 726 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 RIPOR2Q9Y4F9 1068 aa15.21■□□□□ 0.03
SMARCA4-202ENST00000413806 NDC80O14777 642 aa15.21■□□□□ 0.02
SMARCA4-202ENST00000413806 SLC1A4P43007 532 aa15.21■□□□□ 0.02
SMARCA4-202ENST00000413806 EDC3Q96F86 508 aaKnown RBP15.21■□□□□ 0.02
SMARCA4-202ENST00000413806 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.02
SMARCA4-202ENST00000413806 A0A1W2PQ27 194 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 A0A1W2PQ64 194 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 A0A1W2PQD8 194 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 DDAH1O94760 285 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 PCP11498 1178 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 KLHL30Q0D2K2 578 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 TRIM4Q9C037 500 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 KCNQ3O43525 872 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 SLC8A1P32418 973 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 PSMC4P43686 418 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 SH3BGRP55822 239 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 TRMT44Q8IYL2 757 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 EFCAB6Q5THR3 1501 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 FRMD3A2A2Y4 597 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 LIG3P49916 1009 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 BLZF1Q9H2G9 400 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 PDE6AP16499 860 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 TPX2Q9ULW0 747 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-202ENST00000413806 CCDC169A6NNP5 214 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 STRN3Q13033 797 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 KCNJ18B7U540 433 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 BCRP11274 1271 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 PPFIA1Q13136 1202 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 DYMQ7RTS9 669 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 BLIDQ8IZY5 108 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 FANCBQ8NB91 859 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 ATP8A2Q9NTI2 1148 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 E7EVH7 732 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 MAP7Q14244 749 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 INF2Q27J81 1249 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 DPH6Q7L8W6 267 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 TACO1Q9BSH4 297 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■□□ 14.7
SMARCA4-202ENST00000413806 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 RPS6KA1Q15418 735 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 ARHGEF2Q92974 986 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 KIF1BO60333 1816 aa15.19■□□□□ 0.02
SMARCA4-202ENST00000413806 MORC3Q14149 939 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 RRP15Q9Y3B9 282 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PLEKHG1Q9ULL1 1385 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 OR8K1Q8NGG5 319 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 IFIH1Q9BYX4 1025 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PLCB1Q9NQ66 1216 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PKD2L1Q9P0L9 805 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PDIA3P30101 505 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PPP2R5AQ15172 486 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PHLDB2Q86SQ0 1253 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 ZNF354CQ86Y25 554 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 TGFBRAP1Q8WUH2 860 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 DDX27Q96GQ7 796 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 SMCO2A6NFE2 343 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 GTPBP6O43824 516 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 CEP104O60308 925 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms