RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 VCPKMTQ9H867 229 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 RLFQ13129 1914 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 RASA1P20936 1047 aa18.71■□□□□ 0.59
MCF2L-211ENST00000413354 PDE4BQ07343 736 aa18.71■□□□□ 0.59
MCF2L-211ENST00000413354 CLEC10AQ8IUN9 316 aa18.71■□□□□ 0.59
MCF2L-211ENST00000413354 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
MCF2L-211ENST00000413354 CWC22Q9HCG8 908 aaKnown RBP18.71■□□□□ 0.59
MCF2L-211ENST00000413354 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
MCF2L-211ENST00000413354 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-211ENST00000413354 WDR46O15213 610 aaKnown RBP18.7■□□□□ 0.58
MCF2L-211ENST00000413354 MYCP01106 439 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-211ENST00000413354 EEF2P13639 858 aaKnown RBP18.7■□□□□ 0.58
MCF2L-211ENST00000413354 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
MCF2L-211ENST00000413354 COG2Q14746 738 aa18.7■□□□□ 0.58
MCF2L-211ENST00000413354 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-211ENST00000413354 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
MCF2L-211ENST00000413354 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
MCF2L-211ENST00000413354 PPARAQ07869 468 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 CCDC129Q6ZRS4 1044 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 SIAH1Q8IUQ4 282 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 STK11IPQ8N1F8 1099 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 MB21D1Q8N884 522 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 NUDT12Q9BQG2 462 aa18.69■□□□□ 0.58
MCF2L-211ENST00000413354 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 INHAP05111 366 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 CCL5P13501 91 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 ELNP15502 786 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 EN2P19622 333 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-211ENST00000413354 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
MCF2L-211ENST00000413354 MTFR1Q15390 333 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 PLEKHH3Q7Z736 793 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 NYAP2Q9P242 653 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
MCF2L-211ENST00000413354 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-211ENST00000413354 CNMDO75829 334 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 FLOT1O75955 427 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 HMGCRP04035 888 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-211ENST00000413354 Q3C1V9 767 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 GPR142Q7Z601 462 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 TRMT44Q8IYL2 757 aaKnown RBP18.67■□□□□ 0.58
MCF2L-211ENST00000413354 SPICE1Q8N0Z3 855 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.67■□□□□ 0.58
MCF2L-211ENST00000413354 RNF208Q9H0X6 261 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 PORCNQ9H237 461 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 SYNPO2Q9UMS6 1093 aa18.67■□□□□ 0.58
MCF2L-211ENST00000413354 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 HIP1O00291 1037 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 PEX10O60683 326 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 PRDM1O75626 825 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 GJB1P08034 283 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 TSPY3P0CV98 308 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 TSPY8P0CW00 308 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 XRCC5P13010 732 aaKnown RBP18.66■□□□□ 0.58
MCF2L-211ENST00000413354 CAPN2P17655 700 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 DSG3P32926 999 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 RGS2P41220 211 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 ALX1Q15699 326 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 PPP4R3BQ5MIZ7 849 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 POTEEQ6S8J3 1075 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 FAM227BQ96M60 508 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 IVNS1ABPQ9Y6Y0 642 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
MCF2L-211ENST00000413354 ZNF236Q9UL36 1845 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-211ENST00000413354 IGKV6D-41A0A0C4DH26 115 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 RAD21O60216 631 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 NMIQ13287 307 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-211ENST00000413354 WDR78Q5VTH9 848 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 BTBD7Q9P203 1132 aa18.65■□□□□ 0.58
MCF2L-211ENST00000413354 FOXP2O15409 715 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 TTLL1O95922 423 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 SDSP20132 328 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 CYP2B6P20813 491 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 GJA8P48165 433 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 MORN1Q5T089 497 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 NEDD1Q8NHV4 660 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 APBA2Q99767 749 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 UNC93B1Q9H1C4 597 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 ANAPC4Q9UJX5 808 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 LAMA4Q16363 1823 aa18.64■□□□□ 0.57
MCF2L-211ENST00000413354 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 ZKSCAN1P17029 563 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-211ENST00000413354 SHCBP1Q8NEM2 672 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 ATG4CQ96DT6 458 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 CEP95Q96GE4 821 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 SPATC1LQ9H0A9 340 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
MCF2L-211ENST00000413354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
MCF2L-211ENST00000413354 HSPD1P10809 573 aaKnown RBP18.62■□□□□ 0.57
MCF2L-211ENST00000413354 TFAP4Q01664 338 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms