RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 TPRNQ4KMQ1 711 aa20.96■□□□□ 0.95
CXXC1-202ENST00000412036 DLK2Q6UY11 383 aa20.95■□□□□ 0.95
CXXC1-202ENST00000412036 RNF181Q9P0P0 153 aa20.95■□□□□ 0.95
CXXC1-202ENST00000412036 PALM3A6NDB9 673 aaPredicted RBP20.95■□□□□ 0.94
CXXC1-202ENST00000412036 NCLP19338 710 aaKnown RBP20.95■□□□□ 0.94
CXXC1-202ENST00000412036 KIF23Q02241 960 aaPredicted RBP20.95■□□□□ 0.94
CXXC1-202ENST00000412036 RASA3Q14644 834 aa20.95■□□□□ 0.94
CXXC1-202ENST00000412036 FOXP4Q8IVH2 680 aaPredicted RBP20.95■□□□□ 0.94
CXXC1-202ENST00000412036 TMOD2Q9NZR1 351 aa20.95■□□□□ 0.94
CXXC1-202ENST00000412036 KIF4BQ2VIQ3 1234 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 PRAMEF18Q5VWM3 479 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CTCFLQ8NI51 663 aaPredicted RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 HACL1Q9UJ83 578 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CCDC196A0A1B0GTZ2 297 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CALM1P0DP23 149 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CALM2P0DP24 149 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CALM3P0DP25 149 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 TOP1P11387 765 aaKnown RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 CPLX2Q6PUV4 134 aaKnown RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 OXER1Q8TDS5 423 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 RNF26Q9BY78 433 aaPredicted RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 GZF1Q9H116 711 aaPredicted RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 GPRC5DQ9NZD1 345 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 FZD1Q9UP38 647 aa20.94■□□□□ 0.94
CXXC1-202ENST00000412036 FRMPD2Q68DX3 1309 aaPredicted RBP20.94■□□□□ 0.94
CXXC1-202ENST00000412036 GH2P01242 217 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 PDHBP11177 359 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 NPY5RQ15761 445 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 FKBP1CQ5VVH2 108 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 TYW1BQ6NUM6 668 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 RBM28Q9NW13 759 aaKnown RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 EEF2P13639 858 aaKnown RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 NT5C2P49902 561 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 CEBPZQ03701 1054 aaKnown RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 NOM1Q5C9Z4 860 aaKnown RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 C9orf131Q5VYM1 1079 aa20.93■□□□□ 0.94
CXXC1-202ENST00000412036 CCDC84Q86UT8 332 aaPredicted RBP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.93■□□□□ 0.94
CXXC1-202ENST00000412036 A0A1W2PRG0 241 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 DEXIO95424 95 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 ATP2B2Q01814 1243 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 FAM83AQ86UY5 434 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 GPC2Q8N158 579 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 USP28Q96RU2 1077 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 UBA5Q9GZZ9 404 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 TTLL1O95922 423 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 TMEM87AQ8NBN3 555 aa20.92■□□□□ 0.94
CXXC1-202ENST00000412036 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
CXXC1-202ENST00000412036 POLR2AP24928 1970 aaKnown RBP20.91■□□□□ 0.94
CXXC1-202ENST00000412036 NR5A1Q13285 461 aa20.91■□□□□ 0.94
CXXC1-202ENST00000412036 TTBK2Q6IQ55 1244 aa20.91■□□□□ 0.94
CXXC1-202ENST00000412036 GPKOWQ92917 476 aaPredicted RBP eCLIP20.91■□□□□ 0.948e-6■■■□□ 18.6
CXXC1-202ENST00000412036 BTBD18B2RXH4 712 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 SNHG28P0DPA3 235 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 ABCB5Q2M3G0 1257 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 CCDC178Q5BJE1 867 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 EARS2Q5JPH6 523 aaKnown RBP20.9■□□□□ 0.94
CXXC1-202ENST00000412036 TRIM22Q8IYM9 498 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 MAP3K14Q99558 947 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 FAM205CA6NFA0 338 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 KLRF2D3W0D1 207 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 MYO1BO43795 1136 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 CCDC17Q96LX7 622 aa20.9■□□□□ 0.94
CXXC1-202ENST00000412036 ECE1P42892 770 aa20.89■□□□□ 0.94
CXXC1-202ENST00000412036 ANGEL2Q5VTE6 544 aaKnown RBP20.89■□□□□ 0.94
CXXC1-202ENST00000412036 GLIS2Q9BZE0 524 aaPredicted RBP20.89■□□□□ 0.94
CXXC1-202ENST00000412036 ZSCAN16Q9H4T2 348 aaPredicted RBP20.89■□□□□ 0.94
CXXC1-202ENST00000412036 MMP1P03956 469 aa20.89■□□□□ 0.93
CXXC1-202ENST00000412036 NBPF12Q5TAG4 269 aaPredicted RBP20.89■□□□□ 0.93
CXXC1-202ENST00000412036 ACER1Q8TDN7 264 aa20.89■□□□□ 0.93
CXXC1-202ENST00000412036 TRIM34Q9BYJ4 488 aa20.89■□□□□ 0.93
CXXC1-202ENST00000412036 DEFB129Q9H1M3 183 aa20.89■□□□□ 0.93
CXXC1-202ENST00000412036 PHF20L1A8MW92 1017 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
CXXC1-202ENST00000412036 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
CXXC1-202ENST00000412036 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
CXXC1-202ENST00000412036 GOLGA6L22H0YM25 854 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 MAP3K10Q02779 954 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 ICA1Q05084 483 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 KCTD1Q719H9 257 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 PGBD1Q96JS3 809 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 NUP88Q99567 741 aaPredicted RBP20.88■□□□□ 0.93
CXXC1-202ENST00000412036 GPCPD1Q9NPB8 672 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
CXXC1-202ENST00000412036 PARP1P09874 1014 aaKnown RBP20.87■□□□□ 0.93
CXXC1-202ENST00000412036 PDIA4P13667 645 aaKnown RBP20.87■□□□□ 0.93
CXXC1-202ENST00000412036 U2AF2P26368 475 aaKnown RBP eCLIP20.87■□□□□ 0.936e-8■□□□□ 9.8
CXXC1-202ENST00000412036 KIF5BP33176 963 aa20.87■□□□□ 0.93
CXXC1-202ENST00000412036 PFKFB3Q16875 520 aaPredicted RBP20.87■□□□□ 0.93
CXXC1-202ENST00000412036 TMEM179Q6ZVK1 233 aa20.87■□□□□ 0.93
CXXC1-202ENST00000412036 DIS3L2Q8IYB7 885 aaKnown RBP20.87■□□□□ 0.93
CXXC1-202ENST00000412036 PHF20Q9BVI0 1012 aa20.87■□□□□ 0.93
CXXC1-202ENST00000412036 WNT7AO00755 349 aa20.87■□□□□ 0.93
CXXC1-202ENST00000412036 SLC16A2P36021 539 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms