RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 ALPK1Q96QP1 1244 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 CNNM2Q9H8M5 875 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 GOLGA2P5Q9HBQ8 144 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
RNU4-55P-201ENST00000410731 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 SCAMP3O14828 347 aaKnown RBP5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 LRRN2O75325 713 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 MCM4P33991 863 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 CCNFP41002 786 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 AFMP43652 599 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 CHMP4BP1P59074 171 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 LRRFIP1Q32MZ4 808 aaKnown RBP5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 ZNF394Q53GI3 561 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 OGFOD2Q6N063 350 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 NLRC3Q7RTR2 1065 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 ZSWIM9Q86XI8 627 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 SLAMF8Q9P0V8 285 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 DUSP13Q9UII6 198 aa5.87□□□□□ -1.47
RNU4-55P-201ENST00000410731 RAD51AP2Q09MP3 1159 aa5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 KRTAP1-3Q8IUG1 177 aa5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 POU5F2Q8N7G0 328 aa5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 DDX41Q9UJV9 622 aaKnown RBP5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 PCDHGB7Q9Y5F8 929 aa5.86□□□□□ -1.47
RNU4-55P-201ENST00000410731 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 TNFRSF10CO14798 259 aa5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 POLR2BP30876 1174 aaKnown RBP5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 KCNMB1Q16558 191 aa5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 TMEM59LQ9UK28 342 aa5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 ZNRF3Q9ULT6 936 aa5.85□□□□□ -1.47
RNU4-55P-201ENST00000410731 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 IMPDH2P12268 514 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 LTKP29376 864 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 RACK1P63244 317 aaKnown RBP5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 EGR3Q06889 387 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 RALGPS1Q5JS13 557 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 NBPF12Q5TAG4 269 aaPredicted RBP5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 FYB2Q5VWT5 728 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 ANTXR1Q9H6X2 564 aa5.84□□□□□ -1.47
RNU4-55P-201ENST00000410731 CLEC3AO75596 197 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 RAC2P15153 192 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 CLEC16AQ2KHT3 1053 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 METTL16Q86W50 562 aaKnown RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 ZNF654Q8IZM8 581 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 ENOX1Q8TC92 643 aaKnown RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 MRRFQ96E11 262 aaKnown RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 ASCC2Q9H1I8 757 aaPredicted RBP5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 PCDHA11Q9Y5I1 949 aa5.83□□□□□ -1.48
RNU4-55P-201ENST00000410731 ZNF503-AS2A6NEH8 195 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 GLI1P08151 1106 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 TAB3Q8N5C8 712 aaPredicted RBP5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 RGS22Q8NE09 1264 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 HDAC8Q9BY41 377 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 FAM53CQ9NYF3 392 aa5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 KIAA1522Q9P206 1035 aaPredicted RBP5.82□□□□□ -1.48
RNU4-55P-201ENST00000410731 HPXP02790 462 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 ZGLP1P0C6A0 271 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 YBX3P16989 372 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 HK2P52789 917 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 TEKQ02763 1124 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 COL9A2Q14055 689 aaPredicted RBP5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 INTS3Q68E01 1043 aaKnown RBP5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 TMEM192Q8IY95 271 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 DAGLBQ8NCG7 672 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 SLC6A18Q96N87 628 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 FERD3LQ96RJ6 166 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 SLC9A7Q96T83 725 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 ADAMTS10Q9H324 1103 aa5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU4-55P-201ENST00000410731 UNCXA6NJT0 531 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 HDLBPQ00341 1268 aaKnown RBP5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 PAK2Q13177 524 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 TMEM67Q5HYA8 995 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 RNF111Q6ZNA4 994 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 TMC3Q7Z5M5 1100 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 RBBP8NLQ8NC74 664 aaPredicted RBP5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 PDZD8Q8NEN9 1154 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 DHX38Q92620 1227 aaKnown RBP5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 SPATA32Q96LK8 384 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 TM9SF2Q99805 663 aa5.8□□□□□ -1.48
RNU4-55P-201ENST00000410731 LRRC10BA6NIK2 292 aa5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 SIGLEC6O43699 453 aa5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 FARP2O94887 1054 aaPredicted RBP5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 C8AP07357 584 aa5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 ACRP10323 421 aa5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 SNW1Q13573 536 aaKnown RBP5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 NT5DC4Q86YG4 428 aa5.79□□□□□ -1.48
RNU4-55P-201ENST00000410731 ZNF655Q8N720 491 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms