RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CASC1Q6TDU7 716 aa26.46■■□□□ 1.83
PTCD3-203ENST00000409783 KIAA1211Q6ZU35 1233 aa26.46■■□□□ 1.83
PTCD3-203ENST00000409783 LPAR1Q92633 364 aa26.46■■□□□ 1.83
PTCD3-203ENST00000409783 PNMA3Q9UL41 463 aa26.46■■□□□ 1.83
PTCD3-203ENST00000409783 PARP14Q460N5 1801 aa26.46■■□□□ 1.83
PTCD3-203ENST00000409783 TTLL1O95922 423 aa26.45■■□□□ 1.82
PTCD3-203ENST00000409783 OSBPP22059 807 aa26.45■■□□□ 1.82
PTCD3-203ENST00000409783 CAP1Q01518 475 aa26.45■■□□□ 1.82
PTCD3-203ENST00000409783 CATSPERGQ6ZRH7 1159 aa26.45■■□□□ 1.82
PTCD3-203ENST00000409783 P2RX7Q99572 595 aaKnown RBP26.45■■□□□ 1.82
PTCD3-203ENST00000409783 RPAP3Q9H6T3 665 aaPredicted RBP26.45■■□□□ 1.82
PTCD3-203ENST00000409783 TCP11L1Q9NUJ3 509 aa26.45■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L15C9J2P7 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L13C9JLJ4 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L11C9JVI0 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L18D6R9N7 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L22D6RA61 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L17D6RBQ6 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L19D6RCP7 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L20D6RJB6 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 SP3Q02447 781 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 USP17L24Q0WX57 530 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 POTEEQ6S8J3 1075 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 ANO2Q9NQ90 1003 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 SYNPO2Q9UMS6 1093 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 ZSWIM8A7E2V4 1837 aa26.44■■□□□ 1.82
PTCD3-203ENST00000409783 NT5C2P49902 561 aa26.43■■□□□ 1.82
PTCD3-203ENST00000409783 NECTIN1Q15223 517 aa26.43■■□□□ 1.82
PTCD3-203ENST00000409783 SPICE1Q8N0Z3 855 aa26.43■■□□□ 1.82
PTCD3-203ENST00000409783 ESR2Q92731 530 aa26.43■■□□□ 1.82
PTCD3-203ENST00000409783 B4E1Z4 1266 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 F5H6K3 240 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 KDM4AO75164 1064 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 HERVK_113P62684 666 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 IRX3P78415 501 aaPredicted RBP26.42■■□□□ 1.82
PTCD3-203ENST00000409783 KLRC3Q07444 240 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 RCSD1Q6JBY9 416 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 STOX1Q6ZVD7 989 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 LRRC47Q8N1G4 583 aaKnown RBP26.42■■□□□ 1.82
PTCD3-203ENST00000409783 SMCR8Q8TEV9 937 aaPredicted RBP26.42■■□□□ 1.82
PTCD3-203ENST00000409783 GOPCQ9HD26 462 aa26.42■■□□□ 1.82
PTCD3-203ENST00000409783 WDR46O15213 610 aaKnown RBP26.41■■□□□ 1.82
PTCD3-203ENST00000409783 PPP4R3BQ5MIZ7 849 aa26.41■■□□□ 1.82
PTCD3-203ENST00000409783 NDUFB10O96000 172 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 GCLCP48506 637 aaPredicted RBP26.4■■□□□ 1.82
PTCD3-203ENST00000409783 GMCL1P1Q8NEA9 526 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 CD99L2Q8TCZ2 262 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 KRT23Q9C075 422 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 CNNM2Q9H8M5 875 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 ZSWIM5Q9P217 1185 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 STX8Q9UNK0 236 aa26.4■■□□□ 1.82
PTCD3-203ENST00000409783 MGAMO43451 1857 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 E7EWF7 191 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 SLC27A2O14975 620 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 CTGFP29279 349 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 LACTBP83111 547 aaPredicted RBP26.39■■□□□ 1.82
PTCD3-203ENST00000409783 LBX2Q6XYB7 198 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 ERO1AQ96HE7 468 aa26.39■■□□□ 1.82
PTCD3-203ENST00000409783 A0A0G2JMZ2 1700 aa26.39■■□□□ 1.81
PTCD3-203ENST00000409783 SPDYE16A6NNV3 312 aaPredicted RBP26.38■■□□□ 1.81
PTCD3-203ENST00000409783 FAM110CQ1W6H9 321 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 CREB3L3Q68CJ9 461 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 ANKRD13CQ8N6S4 541 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 ZKSCAN3Q9BRR0 538 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 ARHGAP39Q9C0H5 1083 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 TXNRD2Q9NNW7 524 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 RBPJLQ9UBG7 517 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 MORF4L1Q9UBU8 362 aa26.38■■□□□ 1.81
PTCD3-203ENST00000409783 PEX10O60683 326 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 COG2Q14746 738 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 FAM83BQ5T0W9 1011 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 TTC14Q96N46 770 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 NUP88Q99567 741 aaPredicted RBP26.37■■□□□ 1.81
PTCD3-203ENST00000409783 TMEM47Q9BQJ4 181 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 TANGO6Q9C0B7 1094 aa26.37■■□□□ 1.81
PTCD3-203ENST00000409783 CNMDO75829 334 aa26.36■■□□□ 1.81
PTCD3-203ENST00000409783 CTU1Q7Z7A3 348 aaKnown RBP26.36■■□□□ 1.81
PTCD3-203ENST00000409783 RAD21O60216 631 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 TOP1P11387 765 aaKnown RBP26.35■■□□□ 1.81
PTCD3-203ENST00000409783 DSG3P32926 999 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 SLFN13Q68D06 897 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 DGKHQ86XP1 1220 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 GTF3C2Q8WUA4 911 aaPredicted RBP26.35■■□□□ 1.81
PTCD3-203ENST00000409783 ANKS1AQ92625 1134 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 FBXO28Q9NVF7 368 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 MYPNQ86TC9 1320 aa26.35■■□□□ 1.81
PTCD3-203ENST00000409783 COL9A3Q14050 684 aaPredicted RBP26.34■■□□□ 1.81
PTCD3-203ENST00000409783 Q3C1V9 767 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 OTOP1Q7RTM1 612 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 IQCA1Q86XH1 822 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 NCOA7Q8NI08 942 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 GMCL1Q96IK5 515 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 ZSCAN10Q96SZ4 725 aaPredicted RBP26.34■■□□□ 1.81
PTCD3-203ENST00000409783 HOXC10Q9NYD6 342 aa26.34■■□□□ 1.81
PTCD3-203ENST00000409783 COL11A1P12107 1806 aaPredicted RBP26.34■■□□□ 1.81
PTCD3-203ENST00000409783 DOCK3Q8IZD9 2030 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 FLOT1O75955 427 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 TRDNQ13061 729 aa26.33■■□□□ 1.81
PTCD3-203ENST00000409783 CCDC178Q5BJE1 867 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms