RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
SNORD88C-201ENST00000408061 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 SCG2P13521 617 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 AKR1B1P15121 316 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 PKN1Q16512 942 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 RILPL1Q5EBL4 403 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 ZFPM1Q8IX07 1006 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
SNORD88C-201ENST00000408061 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 SBF1O95248 1867 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 BMP15O95972 392 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 TRAF1Q13077 416 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 PCDHAC2Q9Y5I4 1007 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
SNORD88C-201ENST00000408061 MYH4Q9Y623 1939 aa11.9□□□□□ -0.51
SNORD88C-201ENST00000408061 TCP10L2B9ZVM9 353 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 FIBPO43427 364 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 PLEKHA8P1O95397 391 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 PDHBP11177 359 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 TRAPPC10P48553 1259 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 GMPSP49915 693 aaPredicted RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 CACNB3P54284 484 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 GUCY1B3Q02153 619 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 DIS3L2Q8IYB7 885 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 GMCL1P1Q8NEA9 526 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 CEP131Q9UPN4 1083 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
SNORD88C-201ENST00000408061 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 PPP6R2O75170 966 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 KRT2P35908 639 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 ZNF445P59923 1031 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 RASSF7Q02833 373 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 ANO1Q5XXA6 986 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 MICALL2Q8IY33 904 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 DAGLBQ8NCG7 672 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 GLT8D2Q9H1C3 349 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
SNORD88C-201ENST00000408061 A0A1W2PQ27 194 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 A0A1W2PQ64 194 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 ESYT2A0FGR8 921 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 ASNSP08243 561 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 GNA11P29992 359 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 NLRP5P59047 1200 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 ICA1Q05084 483 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 STK38Q15208 465 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 SF3A1Q15459 793 aaKnown RBP11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 DCAF15Q66K64 600 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 LINC00301Q8NCQ3 95 aa11.87□□□□□ -0.51
SNORD88C-201ENST00000408061 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms