RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ARHGEF10LQ9HCE6 1279 aa23.88■■□□□ 1.41
CHKB-201ENST00000406938 MYH4Q9Y623 1939 aa23.88■■□□□ 1.41
CHKB-201ENST00000406938 A0A1W2PRG0 241 aa23.88■■□□□ 1.41
CHKB-201ENST00000406938 CPLX1O14810 134 aa23.88■■□□□ 1.41
CHKB-201ENST00000406938 CTDNEP1O95476 244 aa23.88■■□□□ 1.41
CHKB-201ENST00000406938 FMR1Q06787 632 aaKnown RBP eCLIP23.88■■□□□ 1.41
CHKB-201ENST00000406938 NOL9Q5SY16 702 aaKnown RBP23.88■■□□□ 1.41
CHKB-201ENST00000406938 CTCFLQ8NI51 663 aaPredicted RBP23.88■■□□□ 1.41
CHKB-201ENST00000406938 OTOFQ9HC10 1997 aa23.87■■□□□ 1.41
CHKB-201ENST00000406938 ECE1P42892 770 aa23.87■■□□□ 1.41
CHKB-201ENST00000406938 IREB2P48200 963 aaKnown RBP23.87■■□□□ 1.41
CHKB-201ENST00000406938 NSUN7Q8NE18 718 aaKnown RBP23.87■■□□□ 1.41
CHKB-201ENST00000406938 ACER1Q8TDN7 264 aa23.87■■□□□ 1.41
CHKB-201ENST00000406938 CHMP4CQ96CF2 233 aa23.87■■□□□ 1.41
CHKB-201ENST00000406938 MAP3K14Q99558 947 aa23.87■■□□□ 1.41
CHKB-201ENST00000406938 CCDC196A0A1B0GTZ2 297 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 JAK2O60674 1132 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 TTLL12Q14166 644 aaPredicted RBP23.86■■□□□ 1.41
CHKB-201ENST00000406938 GRM4Q14833 912 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 PPP2R5BQ15173 497 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 CHADLQ6NUI6 762 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.86■■□□□ 1.41
CHKB-201ENST00000406938 LLPHQ9BRT6 129 aaKnown RBP23.86■■□□□ 1.41
CHKB-201ENST00000406938 ZNF408Q9H9D4 720 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 PICK1Q9NRD5 415 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 RBM28Q9NW13 759 aaKnown RBP23.86■■□□□ 1.41
CHKB-201ENST00000406938 SYNPO2Q9UMS6 1093 aa23.86■■□□□ 1.41
CHKB-201ENST00000406938 PTPDC1A2A3K4 754 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 USP17L5A8MUK1 530 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 PDHBP11177 359 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 KIF5BP33176 963 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 MAP3K9P80192 1104 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 VGLL4Q14135 290 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 MOB2Q70IA6 237 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 SMC3Q9UQE7 1217 aa23.85■■□□□ 1.41
CHKB-201ENST00000406938 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 PTPRAP18433 802 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 MAP3K11Q16584 847 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 GMCL1P1Q8NEA9 526 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 MAD2L2Q9UI95 211 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 TMX2Q9Y320 296 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 SNCAIPQ9Y6H5 919 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 RAD21O60216 631 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 PLEKHA8P1O95397 391 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 SNHG28P0DPA3 235 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 NTRK3Q16288 839 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 CPLX2Q6PUV4 134 aaKnown RBP23.84■■□□□ 1.41
CHKB-201ENST00000406938 USP17L2Q6R6M4 530 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 TMTC3Q6ZXV5 915 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 SMARCC2Q8TAQ2 1214 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
CHKB-201ENST00000406938 CDKL5O76039 1030 aa23.83■■□□□ 1.41
CHKB-201ENST00000406938 PARP1P09874 1014 aaKnown RBP23.83■■□□□ 1.41
CHKB-201ENST00000406938 GJB2P29033 226 aa23.83■■□□□ 1.41
CHKB-201ENST00000406938 ARMC9Q7Z3E5 817 aa23.83■■□□□ 1.41
CHKB-201ENST00000406938 CMTR1Q8N1G2 835 aaKnown RBP23.83■■□□□ 1.41
CHKB-201ENST00000406938 STAG2Q8N3U4 1231 aa23.83■■□□□ 1.41
CHKB-201ENST00000406938 CSADQ9Y600 493 aa23.83■■□□□ 1.41
CHKB-201ENST00000406938 F5H6K3 240 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 GOLGA8HP0CJ92 632 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 KLRC3Q07444 240 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 SLFN13Q68D06 897 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 FEZ1Q99689 392 aa23.82■■□□□ 1.4
CHKB-201ENST00000406938 CWC22Q9HCG8 908 aaKnown RBP23.82■■□□□ 1.4
CHKB-201ENST00000406938 PALM3A6NDB9 673 aaPredicted RBP23.81■■□□□ 1.4
CHKB-201ENST00000406938 KIF3CO14782 793 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 ITGBL1O95965 494 aaPredicted RBP23.81■■□□□ 1.4
CHKB-201ENST00000406938 NDUFB10O96000 172 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 IFNAR1P17181 557 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 DDIT3P35638 169 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 ZYXQ15942 572 aaKnown RBP23.81■■□□□ 1.4
CHKB-201ENST00000406938 ANKRD13AQ8IZ07 590 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 PHKBQ93100 1093 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 GOPCQ9HD26 462 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 FRMPD2Q68DX3 1309 aaPredicted RBP23.81■■□□□ 1.4
CHKB-201ENST00000406938 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
CHKB-201ENST00000406938 ASPRV1Q53RT3 343 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 CCDC82Q8N4S0 544 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 DCAF4Q8WV16 495 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 AS3MTQ9HBK9 375 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 ZHX2Q9Y6X8 837 aa23.81■■□□□ 1.4
CHKB-201ENST00000406938 CELF2O95319 508 aaKnown RBP23.8■■□□□ 1.4
CHKB-201ENST00000406938 SLC1A4P43007 532 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 GNAQP50148 359 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 ZNF543Q08ER8 600 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 FUT2Q10981 343 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 CCDC96Q2M329 555 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 SPICE1Q8N0Z3 855 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 SRBD1Q8N5C6 995 aaKnown RBP23.8■■□□□ 1.4
CHKB-201ENST00000406938 GMCL1Q96IK5 515 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 CLMNQ96JQ2 1002 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 WDR18Q9BV38 432 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 VCPKMTQ9H867 229 aa23.8■■□□□ 1.4
CHKB-201ENST00000406938 CNTNAP5Q8WYK1 1306 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 KLRF2D3W0D1 207 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 MTMR2Q13614 643 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 KIAA1755Q5JYT7 1200 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 NBPF11Q86T75 865 aa23.79■■□□□ 1.4
CHKB-201ENST00000406938 ZNF280CQ8ND82 737 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms