RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 SOWAHDA6NJG2 315 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 ORC4O43929 436 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 KIF5CO60282 957 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 PRDM1O75626 825 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 STX17P56962 302 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 ZNF174Q15697 407 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 NPY5RQ15761 445 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 CC2D1AQ6P1N0 951 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 RREB1Q92766 1687 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 ZNF335Q9H4Z2 1342 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 GYG1P46976 350 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 PTGDRQ13258 359 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 E2F4Q16254 413 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 LIMA1Q9UHB6 759 aaKnown RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 RWDD2AQ9UIY3 292 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
CLIP4-204ENST00000404424 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
CLIP4-204ENST00000404424 MYH2Q9UKX2 1941 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 TXLNAP40222 546 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 SIK1P57059 783 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 TRIM14Q14142 442 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 MTF1Q14872 753 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 SF3B3Q15393 1217 aaKnown RBP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 RAD9BQ6WBX8 426 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 TMTC1Q8IUR5 882 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 ANKRD20A12PQ8NF67 263 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 ARFGAP3Q9NP61 516 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 RMND1Q9NWS8 449 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 NT5C2P49902 561 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
CLIP4-204ENST00000404424 PARD6BQ9BYG5 372 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
CLIP4-204ENST00000404424 PDS5AQ29RF7 1337 aaKnown RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 WNT7AO00755 349 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 SCG2P13521 617 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CASP14P31944 242 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 NLRP5P59047 1200 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 BRD3Q15059 726 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 SRGAP1Q7Z6B7 1085 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 COL1A1P02452 1464 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 XDHP47989 1333 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CCDC151A5D8V7 595 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 USP17L21D6R901 530 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 SMIM22K7EJ46 135 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 GYPCP04921 128 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CASP1P29466 404 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 LONP1P36776 959 aaKnown RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-204ENST00000404424 LZTFL1Q9NQ48 299 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 ATP8A2Q9NTI2 1148 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 MYO1AQ9UBC5 1043 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
CLIP4-204ENST00000404424 CYP2D7A0A087X1C5 515 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 SEC31AO94979 1220 aaKnown RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 CALML3P27482 149 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 CYP2C19P33261 490 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 CHMP4BP1P59074 171 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 PAK1Q13153 545 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 KRT31Q15323 416 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 ZNF658Q5TYW1 1059 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 SMYD4Q8IYR2 804 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 CRNKL1Q9BZJ0 848 aaKnown RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 N4BP3O15049 544 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 KIF5BP33176 963 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms