RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KRT32Q14532 448 aa20.83■□□□□ 0.93
CTNS-203ENST00000399306 TAF1CQ15572 869 aaPredicted RBP20.83■□□□□ 0.93
CTNS-203ENST00000399306 GMCL1P1Q8NEA9 526 aa20.83■□□□□ 0.93
CTNS-203ENST00000399306 GTF3C2Q8WUA4 911 aaPredicted RBP20.83■□□□□ 0.93
CTNS-203ENST00000399306 ANKS1AQ92625 1134 aa20.83■□□□□ 0.93
CTNS-203ENST00000399306 ZSWIM5Q9P217 1185 aa20.83■□□□□ 0.93
CTNS-203ENST00000399306 CLIP2Q9UDT6 1046 aa20.83■□□□□ 0.93
CTNS-203ENST00000399306 B4E1Z4 1266 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L15C9J2P7 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L13C9JLJ4 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L11C9JVI0 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L18D6R9N7 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L22D6RA61 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L17D6RBQ6 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L19D6RCP7 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L20D6RJB6 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 WDR46O15213 610 aaKnown RBP20.82■□□□□ 0.92
CTNS-203ENST00000399306 TLR2O60603 784 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 KDM4AO75164 1064 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 VCAM1P19320 739 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 OSBPP22059 807 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 HSPA4P34932 840 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 USP17L24Q0WX57 530 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 TREML2Q5T2D2 321 aa20.82■□□□□ 0.92
CTNS-203ENST00000399306 RALYLQ86SE5 291 aaKnown RBP20.82■□□□□ 0.92
CTNS-203ENST00000399306 TOP1P11387 765 aaKnown RBP20.81■□□□□ 0.92
CTNS-203ENST00000399306 CLEC10AQ8IUN9 316 aa20.81■□□□□ 0.92
CTNS-203ENST00000399306 MYPNQ86TC9 1320 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 ADGRA2Q96PE1 1338 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 F5H6K3 240 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 FOXN1O15353 648 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 GCLCP48506 637 aaPredicted RBP20.8■□□□□ 0.92
CTNS-203ENST00000399306 ATP2B2Q01814 1243 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 KLRC3Q07444 240 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 CRHR2Q13324 411 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 LBX2Q6XYB7 198 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 CATSPERGQ6ZRH7 1159 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 USP26Q9BXU7 913 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
CTNS-203ENST00000399306 HSPA8P11142 646 aaKnown RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 IRX3P78415 501 aaPredicted RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 SART3Q15020 963 aaKnown RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 ZYXQ15942 572 aaKnown RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 RCSD1Q6JBY9 416 aa20.79■□□□□ 0.92
CTNS-203ENST00000399306 MB21D2Q8IYB1 491 aaPredicted RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 GMCL1Q96IK5 515 aa20.79■□□□□ 0.92
CTNS-203ENST00000399306 ZSCAN10Q96SZ4 725 aaPredicted RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 UBAC1Q9BSL1 405 aa20.79■□□□□ 0.92
CTNS-203ENST00000399306 ASCC2Q9H1I8 757 aaPredicted RBP20.79■□□□□ 0.92
CTNS-203ENST00000399306 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
CTNS-203ENST00000399306 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
CTNS-203ENST00000399306 MCCP23508 829 aa20.78■□□□□ 0.92
CTNS-203ENST00000399306 C17orf99Q6UX52 265 aa20.78■□□□□ 0.92
CTNS-203ENST00000399306 RPAP3Q9H6T3 665 aaPredicted RBP20.78■□□□□ 0.92
CTNS-203ENST00000399306 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
CTNS-203ENST00000399306 TAF6LQ9Y6J9 622 aa20.78■□□□□ 0.92
CTNS-203ENST00000399306 GPR25O00155 361 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 NMT2O60551 498 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 TBC1D8O95759 1140 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 NDUFB10O96000 172 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 MCM5P33992 734 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 DGKZQ13574 1117 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 NKX2-3Q8TAU0 364 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 TMEM47Q9BQJ4 181 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 HOXC10Q9NYD6 342 aa20.77■□□□□ 0.92
CTNS-203ENST00000399306 TNKSO95271 1327 aa20.77■□□□□ 0.91
CTNS-203ENST00000399306 RLFQ13129 1914 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 PLA2G6O60733 806 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 COG2Q14746 738 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 SEC23AQ15436 765 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 KIAA1755Q5JYT7 1200 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 CYB5R4Q7L1T6 521 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 ENAHQ8N8S7 591 aaPredicted RBP20.76■□□□□ 0.91
CTNS-203ENST00000399306 SMCR8Q8TEV9 937 aaPredicted RBP20.76■□□□□ 0.91
CTNS-203ENST00000399306 DCAF4Q8WV16 495 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 TMEM87BQ96K49 555 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 PARP14Q460N5 1801 aa20.76■□□□□ 0.91
CTNS-203ENST00000399306 ERICH2A1L162 156 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 CYP2C8P10632 490 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 BCRP11274 1271 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 HERVK_113P62684 666 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 FAM110CQ1W6H9 321 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 C8orf34Q49A92 452 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 LRRC47Q8N1G4 583 aaKnown RBP20.75■□□□□ 0.91
CTNS-203ENST00000399306 TMTC2Q8N394 836 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 NEK1Q96PY6 1258 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 MORF4L1Q9UBU8 362 aa20.75■□□□□ 0.91
CTNS-203ENST00000399306 FKTNO75072 461 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 SNHG28P0DPA3 235 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 ANAPC15P60006 121 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 SPICE1Q8N0Z3 855 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 P2RX7Q99572 595 aaKnown RBP20.74■□□□□ 0.91
CTNS-203ENST00000399306 R3HDMLQ9H3Y0 253 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 FEM1BQ9UK73 627 aa20.74■□□□□ 0.91
CTNS-203ENST00000399306 IFIT3O14879 490 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms