RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 METTL16Q86W50 562 aaKnown RBP21.25■□□□□ 0.99
MBD1-208ENST00000398493 FBXO18Q8NFZ0 1043 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 SIPA1L1O43166 1804 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 USP2O75604 605 aaPredicted RBP21.25■□□□□ 0.99
MBD1-208ENST00000398493 ADD1P35611 737 aaKnown RBP21.25■□□□□ 0.99
MBD1-208ENST00000398493 RRP1BQ14684 758 aaKnown RBP21.25■□□□□ 0.99
MBD1-208ENST00000398493 PPP2R5BQ15173 497 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 GUCY1B3Q02153 619 aa21.24■□□□□ 0.99
MBD1-208ENST00000398493 FOXP4Q8IVH2 680 aaPredicted RBP21.24■□□□□ 0.99
MBD1-208ENST00000398493 NKX2-3Q8TAU0 364 aa21.24■□□□□ 0.99
MBD1-208ENST00000398493 WASF1Q92558 559 aa21.24■□□□□ 0.99
MBD1-208ENST00000398493 RBSNQ9H1K0 784 aa21.24■□□□□ 0.99
MBD1-208ENST00000398493 SERPINB13Q9UIV8 391 aa21.24■□□□□ 0.99
MBD1-208ENST00000398493 PPFIA3O75145 1194 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 NT5C2P49902 561 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 SSRP1Q08945 709 aaKnown RBP21.23■□□□□ 0.99
MBD1-208ENST00000398493 BRAPQ7Z569 592 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 EHD4Q9H223 541 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.23■□□□□ 0.99
MBD1-208ENST00000398493 RCOR1Q9UKL0 485 aa21.23■□□□□ 0.99
MBD1-208ENST00000398493 TBC1D12O60347 775 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 FGRP09769 529 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 SENP2Q9HC62 589 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 PHF20L1A8MW92 1017 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 CDC27P30260 824 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 TRIM29Q14134 588 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
MBD1-208ENST00000398493 ALG1Q9BT22 464 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 NID2Q14112 1375 aa21.22■□□□□ 0.99
MBD1-208ENST00000398493 SHMT1P34896 483 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 NF2P35240 595 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 CCDC173Q0VFZ6 552 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 RTN1Q16799 776 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 SHROOM1Q2M3G4 852 aaPredicted RBP21.21■□□□□ 0.99
MBD1-208ENST00000398493 C16orf86Q6ZW13 317 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 AMOTL1Q8IY63 956 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 KLRG1Q96E93 195 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 ZKSCAN3Q9BRR0 538 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
MBD1-208ENST00000398493 STK36Q9NRP7 1315 aa21.21■□□□□ 0.99
MBD1-208ENST00000398493 RANBP6O60518 1105 aaKnown RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 PRDM1O75626 825 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 RXRAP19793 462 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 CDK8P49336 464 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 JAG1P78504 1218 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 PDE4BQ07343 736 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 CCDC144CPQ8IYA2 1237 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 TRIM22Q8IYM9 498 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 BICD2Q8TD16 824 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 ZSCAN10Q96SZ4 725 aaPredicted RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 GBA2Q9HCG7 927 aaPredicted RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 DDX19AQ9NUU7 478 aaKnown RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 ROBO3Q96MS0 1386 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 UBE2Q2LH0YL09 131 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 ORC4O43929 436 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 PPP1R12BO60237 982 aaPredicted RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 IFNAR1P17181 557 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 INPP5BP32019 993 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 NTRK3Q16288 839 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 DCAF15Q66K64 600 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 TATDN1Q6P1N9 297 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 ZKSCAN4Q969J2 545 aaPredicted RBP21.2■□□□□ 0.98
MBD1-208ENST00000398493 ZNF341Q9BYN7 854 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 ZNF112Q9UJU3 913 aa21.2■□□□□ 0.98
MBD1-208ENST00000398493 TNKSO95271 1327 aa21.19■□□□□ 0.98
MBD1-208ENST00000398493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.19■□□□□ 0.98
MBD1-208ENST00000398493 HOOK2Q96ED9 719 aa21.19■□□□□ 0.98
MBD1-208ENST00000398493 WRNIP1Q96S55 665 aa21.19■□□□□ 0.98
MBD1-208ENST00000398493 FAM217BQ9NTX9 383 aaPredicted RBP21.19■□□□□ 0.98
MBD1-208ENST00000398493 FMNL1O95466 1100 aaPredicted RBP21.18■□□□□ 0.98
MBD1-208ENST00000398493 CALM1P0DP23 149 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 CALM2P0DP24 149 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 CALM3P0DP25 149 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 CEBPZQ03701 1054 aaKnown RBP21.18■□□□□ 0.98
MBD1-208ENST00000398493 MAP3K11Q16584 847 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 ZNF654Q8IZM8 581 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 FANCBQ8NB91 859 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 MYL10Q9BUA6 226 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 NUP62CLQ9H1M0 184 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.18■□□□□ 0.98
MBD1-208ENST00000398493 GDF11O95390 407 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 SEC23AQ15436 765 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 IFIT1BQ5T764 474 aaKnown RBP21.18■□□□□ 0.98
MBD1-208ENST00000398493 OTUD7BQ6GQQ9 843 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
MBD1-208ENST00000398493 CATIPQ7Z7H3 387 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 PHKBQ93100 1093 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 USP28Q96RU2 1077 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 SLC26A6Q9BXS9 759 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 RTEL1Q9NZ71 1219 aa21.18■□□□□ 0.98
MBD1-208ENST00000398493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.18■□□□□ 0.98
MBD1-208ENST00000398493 MYH15Q9Y2K3 1946 aa21.17■□□□□ 0.98
MBD1-208ENST00000398493 GNL2Q13823 731 aaKnown RBP21.17■□□□□ 0.98
MBD1-208ENST00000398493 C2orf69Q8N8R5 385 aa21.17■□□□□ 0.98
MBD1-208ENST00000398493 PGBD1Q96JS3 809 aa21.17■□□□□ 0.98
MBD1-208ENST00000398493 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.17■□□□□ 0.98
MBD1-208ENST00000398493 SWAP70Q9UH65 585 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms