RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IRS2Q9Y4H2 1338 aa27.11■■□□□ 1.93
PABPN1-202ENST00000397276 CCAR2Q8N163 923 aaKnown RBP27.11■■□□□ 1.93
PABPN1-202ENST00000397276 SLC44A5Q8NCS7 719 aa27.11■■□□□ 1.93
PABPN1-202ENST00000397276 SYMPKQ92797 1274 aaKnown RBP27.11■■□□□ 1.93
PABPN1-202ENST00000397276 MKNK2Q9HBH9 465 aa27.11■■□□□ 1.93
PABPN1-202ENST00000397276 VWA3AA6NCI4 1184 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 SBK1Q52WX2 424 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 SAP30BPQ9UHR5 308 aaKnown RBP27.1■■□□□ 1.93
PABPN1-202ENST00000397276 USP17L3A6NCW0 530 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 USP17L4A6NCW7 530 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 ELF2Q15723 593 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 USP17L1Q7RTZ2 530 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 KAT14Q9H8E8 782 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 IL17RBQ9NRM6 502 aa27.1■■□□□ 1.93
PABPN1-202ENST00000397276 MORC2Q9Y6X9 1032 aaPredicted RBP27.1■■□□□ 1.93
PABPN1-202ENST00000397276 SCG2P13521 617 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 NYAP1Q6ZVC0 841 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 STAG2Q8N3U4 1231 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 STAMQ92783 540 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 ST7Q9NRC1 585 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 ZNF831Q5JPB2 1677 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 MYH6P13533 1939 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 PTGDRQ13258 359 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 TTC38Q5R3I4 469 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 C12orf60Q5U649 245 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 WDR66Q8TBY9 1149 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.09■■□□□ 1.93
PABPN1-202ENST00000397276 MAPKAPK5Q8IW41 473 aa27.09■■□□□ 1.93
PABPN1-202ENST00000397276 GPKOWQ92917 476 aaPredicted RBP eCLIP27.09■■□□□ 1.932e-8■□□□□ 11
PABPN1-202ENST00000397276 CDK11BP21127 795 aaKnown RBP27.08■■□□□ 1.93
PABPN1-202ENST00000397276 FBXO38Q6PIJ6 1188 aa27.08■■□□□ 1.93
PABPN1-202ENST00000397276 CCDC150Q8NCX0 1101 aa27.08■■□□□ 1.93
PABPN1-202ENST00000397276 RPGRQ92834 1020 aaKnown RBP27.08■■□□□ 1.93
PABPN1-202ENST00000397276 NFE2L3Q9Y4A8 694 aa27.08■■□□□ 1.93
PABPN1-202ENST00000397276 MCM7P33993 719 aa27.08■■□□□ 1.92
PABPN1-202ENST00000397276 SARSP49591 514 aaKnown RBP27.08■■□□□ 1.92
PABPN1-202ENST00000397276 TNFRSF25Q93038 417 aa27.08■■□□□ 1.92
PABPN1-202ENST00000397276 LEMD3Q9Y2U8 911 aa27.08■■□□□ 1.92
PABPN1-202ENST00000397276 PLCD1P51178 756 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 MEX3CQ5U5Q3 659 aaKnown RBP27.07■■□□□ 1.92
PABPN1-202ENST00000397276 E4F1Q66K89 784 aaPredicted RBP27.07■■□□□ 1.92
PABPN1-202ENST00000397276 PRR5LQ6MZQ0 368 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 GPSM2P81274 684 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 MORC3Q14149 939 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 PNMA1Q8ND90 353 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 XDHP47989 1333 aa27.07■■□□□ 1.92
PABPN1-202ENST00000397276 KLHL10Q6JEL2 608 aa27.06■■□□□ 1.92
PABPN1-202ENST00000397276 MKRN1Q9UHC7 482 aaKnown RBP27.06■■□□□ 1.92
PABPN1-202ENST00000397276 TNRC6CQ9HCJ0 1690 aaKnown RBP27.06■■□□□ 1.92
PABPN1-202ENST00000397276 CBFA2T2O43439 604 aa27.06■■□□□ 1.92
PABPN1-202ENST00000397276 ZNF804AQ7Z570 1209 aa27.06■■□□□ 1.92
PABPN1-202ENST00000397276 GJD4Q96KN9 370 aaPredicted RBP27.06■■□□□ 1.92
PABPN1-202ENST00000397276 STX8Q9UNK0 236 aa27.06■■□□□ 1.92
PABPN1-202ENST00000397276 PFKFB3Q16875 520 aaPredicted RBP27.05■■□□□ 1.92
PABPN1-202ENST00000397276 NT5DC1Q5TFE4 455 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 ELOA2Q8IYF1 753 aaPredicted RBP27.05■■□□□ 1.92
PABPN1-202ENST00000397276 RASGRP4Q8TDF6 673 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 UFL1O94874 794 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 TSPY3P0CV98 308 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 TSPY8P0CW00 308 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 KANK3Q6NY19 840 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 MED15Q96RN5 788 aa27.05■■□□□ 1.92
PABPN1-202ENST00000397276 SAMSN1Q9NSI8 373 aaKnown RBP27.05■■□□□ 1.92
PABPN1-202ENST00000397276 KIF5BP33176 963 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 MLKLQ8NB16 471 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 LRRN4CLQ8ND94 238 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 INTS13Q9NVM9 706 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 BAG3O95817 575 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 TOP1P11387 765 aaKnown RBP27.04■■□□□ 1.92
PABPN1-202ENST00000397276 SMYD4Q8IYR2 804 aaPredicted RBP27.04■■□□□ 1.92
PABPN1-202ENST00000397276 PAGE5Q96GU1 130 aa27.04■■□□□ 1.92
PABPN1-202ENST00000397276 NOL10Q9BSC4 688 aaKnown RBP27.04■■□□□ 1.92
PABPN1-202ENST00000397276 STX17P56962 302 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 ZNF444Q8N0Y2 327 aaPredicted RBP27.03■■□□□ 1.92
PABPN1-202ENST00000397276 ZNF397Q8NF99 534 aaPredicted RBP27.03■■□□□ 1.92
PABPN1-202ENST00000397276 ZBTB22O15209 634 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 GABPB1Q06547 395 aaPredicted RBP27.03■■□□□ 1.92
PABPN1-202ENST00000397276 CDC25AP30304 524 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 COL24A1Q17RW2 1714 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 RASGRP2Q7LDG7 609 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 VSTM4Q8IW00 320 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 FERMT2Q96AC1 680 aa27.03■■□□□ 1.92
PABPN1-202ENST00000397276 TERF2Q15554 542 aa27.02■■□□□ 1.92
PABPN1-202ENST00000397276 GOLGA8HP0CJ92 632 aa27.02■■□□□ 1.92
PABPN1-202ENST00000397276 AMOTL1Q8IY63 956 aa27.02■■□□□ 1.92
PABPN1-202ENST00000397276 CPVLQ9H3G5 476 aa27.02■■□□□ 1.92
PABPN1-202ENST00000397276 DACH1Q9UI36 760 aa27.02■■□□□ 1.92
PABPN1-202ENST00000397276 KRT222Q8N1A0 295 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 PPP1R13BQ96KQ4 1090 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 CD209Q9NNX6 404 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 NRDCO43847 1150 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 COBLO75128 1261 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 BTDP43251 543 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 GSTO1P78417 241 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 ATP2C1P98194 919 aaPredicted RBP27.01■■□□□ 1.91
PABPN1-202ENST00000397276 DGKHQ86XP1 1220 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 BLZF1Q9H2G9 400 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 ZNF446Q9NWS9 450 aa27.01■■□□□ 1.91
PABPN1-202ENST00000397276 GOLGB1Q14789 3259 aaKnown RBP27.01■■□□□ 1.91
PABPN1-202ENST00000397276 SERPINB2P05120 415 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms