RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 CTCFLQ8NI51 663 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 WDR18Q9BV38 432 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 RBBP6Q7Z6E9 1792 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 GOLGA8AA7E2F4 631 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 PTPRAP18433 802 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 GSE1Q14687 1217 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 BAZ2BQ9UIF8 2168 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 COL11A1P12107 1806 aaPredicted RBP11.52□□□□□ -0.56
DDX39B-202ENST00000396172 PFKFB2O60825 505 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 CDKL5O76039 1030 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.57
DDX39B-202ENST00000396172 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
DDX39B-202ENST00000396172 GNAQP50148 359 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 PPATQ06203 517 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 LDLRAD1Q5T700 205 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 ZNF280CQ8ND82 737 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 DCAF4Q8WV16 495 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 TMX3Q96JJ7 454 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 TMX2Q9Y320 296 aa11.52□□□□□ -0.57
DDX39B-202ENST00000396172 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 PDIA3P30101 505 aaKnown RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 RTN1Q16799 776 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 NUP133Q8WUM0 1156 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 LPAR1Q92633 364 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 GTF3C6Q969F1 213 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 KIAA1683Q9H0B3 1180 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 BRPF3Q9ULD4 1205 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 CPLX1O14810 134 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 TROAPQ12815 778 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 PPIL2Q13356 520 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 GRM4Q14833 912 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 ME3Q16798 604 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 SHROOM1Q2M3G4 852 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-202ENST00000396172 CLEC10AQ8IUN9 316 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 GMCL1Q96IK5 515 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 LZTS2Q9BRK4 669 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 FZD1Q9UP38 647 aa11.51□□□□□ -0.57
DDX39B-202ENST00000396172 PARP1P09874 1014 aaKnown RBP11.5□□□□□ -0.57
DDX39B-202ENST00000396172 JAG1P78504 1218 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 FANCBQ8NB91 859 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 SLC10A4Q96EP9 437 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 INTS4Q96HW7 963 aaKnown RBP11.5□□□□□ -0.57
DDX39B-202ENST00000396172 LLPHQ9BRT6 129 aaKnown RBP11.5□□□□□ -0.57
DDX39B-202ENST00000396172 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 RLFQ13129 1914 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 A0A0G2JMZ2 1700 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 SLC1A4P43007 532 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 STK3Q13188 491 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 TMOD4Q9NZQ9 345 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
DDX39B-202ENST00000396172 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
DDX39B-202ENST00000396172 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 F5H6K3 240 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 UBE2Q2LH0YL09 131 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 CXCL11O14625 94 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
DDX39B-202ENST00000396172 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
DDX39B-202ENST00000396172 PDHBP11177 359 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 BACE1P56817 501 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 KLRC3Q07444 240 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 CUL4AQ13619 759 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 C12orf42Q96LP6 360 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 HPS5Q9UPZ3 1129 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
DDX39B-202ENST00000396172 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 TMEM88BA6NKF7 163 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 RAD21O60216 631 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 LARGE1O95461 756 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 ECE1P42892 770 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 HUNKP57058 714 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
DDX39B-202ENST00000396172 ZNF543Q08ER8 600 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 SCRN1Q12765 414 aa11.48□□□□□ -0.57
DDX39B-202ENST00000396172 SPP2Q13103 211 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms