RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 ERVK-24P63145 666 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 SPICE1Q8N0Z3 855 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 SLAIN1Q8ND83 568 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 VCPKMTQ9H867 229 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 GOPCQ9HD26 462 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 RBPJLQ9UBG7 517 aa20.83■□□□□ 0.93
UPK3A-202ENST00000396082 DOCK3Q8IZD9 2030 aa20.83■□□□□ 0.92
UPK3A-202ENST00000396082 GREB1LQ9C091 1923 aaPredicted RBP20.82■□□□□ 0.92
UPK3A-202ENST00000396082 RBBP6Q7Z6E9 1792 aaKnown RBP20.82■□□□□ 0.92
UPK3A-202ENST00000396082 ADCY3O60266 1144 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 CCNA1P78396 465 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 VPS53Q5VIR6 699 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 SIAH1Q8IUQ4 282 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 DIAPH3Q9NSV4 1193 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 RABGAP1Q9Y3P9 1069 aa20.82■□□□□ 0.92
UPK3A-202ENST00000396082 POTEFA5A3E0 1075 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 WDR46O15213 610 aaKnown RBP20.81■□□□□ 0.92
UPK3A-202ENST00000396082 TSPY3P0CV98 308 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 TSPY8P0CW00 308 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 SDSP20132 328 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 MAPK4P31152 587 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 UBXN2AP68543 259 aa20.81■□□□□ 0.92
UPK3A-202ENST00000396082 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
UPK3A-202ENST00000396082 CCDC171Q6TFL3 1326 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 SPDYE16A6NNV3 312 aaPredicted RBP20.8■□□□□ 0.92
UPK3A-202ENST00000396082 HIP1O00291 1037 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 FOXP2O15409 715 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 FLOT1O75955 427 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
UPK3A-202ENST00000396082 IRF5Q13568 498 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 COG2Q14746 738 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 KIAA1755Q5JYT7 1200 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 WDR78Q5VTH9 848 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.8■□□□□ 0.92
UPK3A-202ENST00000396082 HOXC10Q9NYD6 342 aa20.8■□□□□ 0.92
UPK3A-202ENST00000396082 MYH4Q9Y623 1939 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 ELNP15502 786 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 PDE4AP27815 886 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 CTDSPL2Q05D32 466 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 Q3C1V9 767 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 LBX2Q6XYB7 198 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 ZNF589Q86UQ0 364 aaPredicted RBP20.79■□□□□ 0.92
UPK3A-202ENST00000396082 PORCNQ9H237 461 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 NYAP2Q9P242 653 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 KIAA0100Q14667 2235 aaKnown RBP20.79■□□□□ 0.92
UPK3A-202ENST00000396082 HTTP42858 3142 aa20.79■□□□□ 0.92
UPK3A-202ENST00000396082 MTFR1Q15390 333 aa20.78■□□□□ 0.92
UPK3A-202ENST00000396082 CWC27Q6UX04 472 aaKnown RBP20.78■□□□□ 0.92
UPK3A-202ENST00000396082 PXYLP1Q8TE99 480 aa20.78■□□□□ 0.92
UPK3A-202ENST00000396082 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
UPK3A-202ENST00000396082 NUDT12Q9BQG2 462 aa20.78■□□□□ 0.92
UPK3A-202ENST00000396082 CNMDO75829 334 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 HSPD1P10809 573 aaKnown RBP20.77■□□□□ 0.92
UPK3A-202ENST00000396082 TFAP4Q01664 338 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 ALX1Q15699 326 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 FAM47AQ5JRC9 791 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 POTEEQ6S8J3 1075 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 PLEKHH3Q7Z736 793 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 CEP95Q96GE4 821 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 TOMM22Q9NS69 142 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 BTBD7Q9P203 1132 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 CLIP2Q9UDT6 1046 aa20.77■□□□□ 0.92
UPK3A-202ENST00000396082 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 TSPY2A6NKD2 308 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 FGAP02671 866 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 INHAP05111 366 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 EN2P19622 333 aaPredicted RBP20.76■□□□□ 0.91
UPK3A-202ENST00000396082 CYP2B6P20813 491 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 DSG3P32926 999 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 TTC22Q5TAA0 569 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 NEDD1Q8NHV4 660 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 RNF208Q9H0X6 261 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 GJD2Q9UKL4 321 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 IVNS1ABPQ9Y6Y0 642 aa20.76■□□□□ 0.91
UPK3A-202ENST00000396082 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 IGKV6D-41A0A0C4DH26 115 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 TTLL1O95922 423 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 CCL5P13501 91 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 PLS1Q14651 629 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 FAM83BQ5T0W9 1011 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 ATG4CQ96DT6 458 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 PLXNB2O15031 1838 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 PARP14Q460N5 1801 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
UPK3A-202ENST00000396082 RLFQ13129 1914 aa20.74■□□□□ 0.91
UPK3A-202ENST00000396082 RANBP6O60518 1105 aaKnown RBP20.74■□□□□ 0.91
UPK3A-202ENST00000396082 HAND2P61296 217 aa20.74■□□□□ 0.91
UPK3A-202ENST00000396082 PPP4R3BQ5MIZ7 849 aa20.74■□□□□ 0.91
UPK3A-202ENST00000396082 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
UPK3A-202ENST00000396082 ISY1Q9ULR0 285 aaKnown RBP20.74■□□□□ 0.91
UPK3A-202ENST00000396082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.74■□□□□ 0.91
UPK3A-202ENST00000396082 F5H6K3 240 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 NDUFB10O96000 172 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 HMGCRP04035 888 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 GSPT1P15170 499 aaKnown RBP20.73■□□□□ 0.91
UPK3A-202ENST00000396082 RGS2P41220 211 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms