RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 ABCC8Q09428 1581 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ROCK1Q13464 1354 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 RPAP1Q9BWH6 1393 aaPredicted RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 CADPSQ9ULU8 1353 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 USP17L3A6NCW0 530 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 USP17L4A6NCW7 530 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 TMEM232C9JQI7 657 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ZBED4O75132 1171 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 MSL3P1P0C860 447 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 SLC8A1P32418 973 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ATP1A2P50993 1020 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 TSNAXIP1Q2TAA8 658 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC57Q2TAC2 916 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 CDCA8Q53HL2 280 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 SH2D4BQ5SQS7 431 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ACBD5Q5T8D3 534 aaPredicted RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 SOGA3Q5TF21 947 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 IER5Q5VY09 327 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 USP17L2Q6R6M4 530 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 USP17L1Q7RTZ2 530 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 TRIM74Q86UV6 250 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 TRIM73Q86UV7 250 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 NCAPG2Q86XI2 1143 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 WDR63Q8IWG1 891 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 IQCF2Q8IXL9 164 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 RNF168Q8IYW5 571 aaPredicted RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 MIGA1Q8NAN2 632 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 GALNT11Q8NCW6 608 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 SAAL1Q96ER3 474 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 RSRC1Q96IZ7 334 aaKnown RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 DRC1Q96MC2 740 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ZNF396Q96N95 335 aaPredicted RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 UCN2Q96RP3 112 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 GZF1Q9H116 711 aaPredicted RBP4.15□□□□□ -1.75
XRCC4-203ENST00000396027 RBSNQ9H1K0 784 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 ZNF358Q9NW07 568 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 QPCTLQ9NXS2 382 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 RUSC2Q8N2Y8 1516 aa4.15□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC171Q6TFL3 1326 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 CTTNBP2Q8WZ74 1663 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 WDR97A6NE52 1622 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 SHTN1A0MZ66 631 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 UNCXA6NJT0 531 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 POM121CA8CG34 1229 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 M0R2N6 131 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 LIN7AO14910 233 aaPredicted RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 ATP9BO43861 1147 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 GAS2O43903 313 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 OPA1O60313 960 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 EZRP15311 586 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 HOXA5P20719 270 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 ELF1P32519 619 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 PREPP48147 710 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 RPS6KA3P51812 740 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 PSMA6P60900 246 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 HDLBPQ00341 1268 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 IFFO1Q0D2I5 559 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 GRIK3Q13003 919 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 SEPT7Q16181 437 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 NBPF8Q3BBV2 869 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 CEP135Q66GS9 1140 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 RSPH3Q86UC2 560 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 LUZP1Q86V48 1076 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 LCA5Q86VQ0 697 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 LRRC49Q8IUZ0 686 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC65Q8IXS2 484 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 RPAP2Q8IXW5 612 aaPredicted RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 MAF1Q9H063 256 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 UNC45AQ9H3U1 944 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 RMI1Q9H9A7 625 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 RC3H2Q9HBD1 1191 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 KCND1Q9NSA2 647 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 IRAK4Q9NWZ3 460 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 POLKQ9UBT6 870 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 ODF2LQ9ULJ1 636 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 LRRFIP2Q9Y608 721 aaKnown RBP4.14□□□□□ -1.75
XRCC4-203ENST00000396027 COMMD10Q9Y6G5 202 aa4.14□□□□□ -1.75
XRCC4-203ENST00000396027 POLR1AO95602 1720 aaPredicted RBP4.13□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC18Q5T9S5 1454 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 ANKRD36BQ8N2N9 1353 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 ABLIM1O14639 778 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 ERLIN2O94905 339 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 RTN3O95197 1032 aaPredicted RBP4.13□□□□□ -1.75
XRCC4-203ENST00000396027 GHRHP01286 108 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 MYBL2P10244 700 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 IDO1P14902 403 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
XRCC4-203ENST00000396027 DDIT3P35638 169 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 POU5F1Q01860 360 aaKnown RBP4.13□□□□□ -1.75
XRCC4-203ENST00000396027 NCBP1Q09161 790 aaKnown RBP4.13□□□□□ -1.75
XRCC4-203ENST00000396027 POSTNQ15063 836 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 PLCB4Q15147 1175 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 CCDC178Q5BJE1 867 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 SH3PXD2AQ5TCZ1 1133 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 NUGGCQ68CJ6 796 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 POTEAQ6S8J7 498 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 TMCO3Q6UWJ1 677 aa4.13□□□□□ -1.75
XRCC4-203ENST00000396027 SYT10Q6XYQ8 523 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms