RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 GTF2IP78347 998 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 KRT83P78385 493 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TBC1D8BQ0IIM8 1120 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TRAF1Q13077 416 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 ERMNQ8TAM6 284 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 CCDC102AQ96A19 550 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 FAM84BQ96KN1 310 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 SPTLC3Q9NUV7 552 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 AK9Q5TCS8 1911 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 CTAGE15A4D2H0 777 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 SMCO2A6NFE2 343 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 GTPBP6O43824 516 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 CTAGE8P0CG41 777 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 MCM3P25205 808 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 KRT9P35527 623 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 IQCB1Q15051 598 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 MAP9Q49MG5 647 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TMED8Q6PL24 325 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 CTAGE6Q86UF2 777 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TMTC1Q8IUR5 882 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 CTAGE4Q8IX94 777 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 REXO1Q8N1G1 1221 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 CSGALNACT2Q8N6G5 542 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 CEP112Q8N8E3 955 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 ENAHQ8N8S7 591 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 ENOX1Q8TC92 643 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 NELFBQ8WX92 580 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.23
BDNF-203ENST00000395978 MMRN2Q9H8L6 949 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 MAN1B1Q9UKM7 699 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 PARP3Q9Y6F1 533 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 PRDX5P30044 214 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 LONP1P36776 959 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 PAFAH1B1P43034 410 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 BTDP43251 543 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 NT5C2P49902 561 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TUBB4BP68371 445 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 SF3B3Q15393 1217 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 INF2Q27J81 1249 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 FAM182BQ5T319 152 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 MARCH10Q8NA82 808 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 ZNF579Q8NAF0 562 aaKnown RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 TAF4BQ92750 862 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 GOLGA1Q92805 767 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 FUCA2Q9BTY2 467 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 TAB2Q9NYJ8 693 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 LRWD1Q9UFC0 647 aa7.38□□□□□ -1.23
BDNF-203ENST00000395978 ZNF215Q9UL58 517 aaPredicted RBP7.38□□□□□ -1.23
BDNF-203ENST00000395978 KRT86O43790 486 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 WDHD1O75717 1129 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 PLEKHA8P1O95397 391 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 EVCP57679 992 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ARID5BQ14865 1188 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ENOX2Q16206 610 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 TMTC3Q6ZXV5 915 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CABP7Q86V35 215 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 DGKHQ86XP1 1220 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 GRAMD1CQ8IYS0 662 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CCDC42Q96M95 316 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 BPIFA3Q9BQP9 254 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 OGFRQ9NZT2 677 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 TOPAZ1Q8N9V7 1692 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 POLR3GO15318 223 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 GOLGA8HP0CJ92 632 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 U2AF2P26368 475 aaKnown RBP eCLIP7.37□□□□□ -1.23
BDNF-203ENST00000395978 SYCP1Q15431 976 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 AXDND1Q5T1B0 1012 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 TBC1D9BQ66K14 1250 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CNNM4Q6P4Q7 775 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 SHC4Q6S5L8 630 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 DPP8Q6V1X1 898 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 VPS36Q86VN1 386 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ENGASEQ8NFI3 743 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ALS2CR12Q96Q35 445 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CRACR2AQ9BSW2 395 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CARD6Q9BX69 1037 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 NAA15Q9BXJ9 866 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 JADE2Q9NQC1 790 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 GUCA1BQ9UMX6 200 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 TTF2Q9UNY4 1162 aaKnown RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 STX10O60499 249 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 BBOX1O75936 387 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 NTSR2O95665 410 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ADCY7P51828 1080 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 KIF5AQ12840 1032 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ITPK1Q13572 414 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 ELF2Q15723 593 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CT47A1Q5JQC4 288 aaPredicted RBP7.37□□□□□ -1.23
BDNF-203ENST00000395978 TCERG1LQ5VWI1 586 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 CYP26C1Q6V0L0 522 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 LEKR1Q6ZMV7 388 aa7.37□□□□□ -1.23
BDNF-203ENST00000395978 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms