RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 EVI5O60447 810 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 SEC24BO95487 1268 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 Q3C1V9 767 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 IER5LQ5T953 404 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
CNIH1-202ENST00000395573 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
CNIH1-202ENST00000395573 PAWRQ96IZ0 340 aaKnown RBP13.35□□□□□ -0.27
CNIH1-202ENST00000395573 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 PORCNQ9H237 461 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 LAMA3Q16787 3333 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
CNIH1-202ENST00000395573 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
CNIH1-202ENST00000395573 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
CNIH1-202ENST00000395573 VCAM1P19320 739 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 RGS2P41220 211 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 TRMT44Q8IYL2 757 aaKnown RBP13.34□□□□□ -0.27
CNIH1-202ENST00000395573 LCORLQ8N3X6 602 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 ANKLE1Q8NAG6 615 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 BOLA2Q9H3K6 86 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
CNIH1-202ENST00000395573 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
CNIH1-202ENST00000395573 MCM3APO60318 1980 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 GUCY1A2P33402 732 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 CCNA1P78396 465 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 GABPAQ06546 454 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 SEPT2Q15019 361 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNIH1-202ENST00000395573 RPAP3Q9H6T3 665 aaPredicted RBP13.33□□□□□ -0.28
CNIH1-202ENST00000395573 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
CNIH1-202ENST00000395573 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
CNIH1-202ENST00000395573 CNMDO75829 334 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 GLRX3O76003 335 aaKnown RBP13.32□□□□□ -0.28
CNIH1-202ENST00000395573 MBD4O95243 580 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 CYP2D6P10635 497 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 ATP5JP18859 108 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 ADD2P35612 726 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 CCL14Q16627 93 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 MORN1Q5T089 497 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 MAP3K21Q5TCX8 1036 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 USP6NLQ92738 828 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 APBA2Q99767 749 aa13.32□□□□□ -0.28
CNIH1-202ENST00000395573 COL6A3P12111 3177 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
CNIH1-202ENST00000395573 CACNB2Q08289 660 aaPredicted RBP13.31□□□□□ -0.28
CNIH1-202ENST00000395573 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 C7orf61Q8IZ16 206 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 SLC44A5Q8NCS7 719 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 HAUS7Q99871 368 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 OGDHLQ9ULD0 1010 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
CNIH1-202ENST00000395573 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 PRKAB2O43741 272 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 DYNLL2Q96FJ2 89 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 PRO3102Q9H379 93 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 C11orf49Q9H6J7 331 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 ATP8A2Q9NTI2 1148 aa13.3□□□□□ -0.28
CNIH1-202ENST00000395573 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
CNIH1-202ENST00000395573 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
CNIH1-202ENST00000395573 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
CNIH1-202ENST00000395573 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
CNIH1-202ENST00000395573 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
CNIH1-202ENST00000395573 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
CNIH1-202ENST00000395573 CYP2D7A0A087X1C5 515 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 CHGBP05060 677 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 AKR1B1P15121 316 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 PTPREP23469 700 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 PSEN1P49768 467 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 ICA1Q05084 483 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 COG2Q14746 738 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
CNIH1-202ENST00000395573 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms