RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 KIDINS220Q9ULH0 1771 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 E2F6O75461 281 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 ATP5JP18859 108 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SCNN1BP51168 640 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 PAK2Q13177 524 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SLC39A6Q13433 755 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CEP85Q6P2H3 762 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 TEX9Q8N6V9 391 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 MSANTD4Q8NCY6 345 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 TTC14Q96N46 770 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 NEUROD6Q96NK8 337 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CDC5LQ99459 802 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 MEIS3Q99687 375 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 ZNF232Q9UNY5 417 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 ATP1A3P13637 1013 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SEC24CP53992 1094 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 NANOGNBQ7Z5D8 188 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 CCDC43Q96MW1 224 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 SLF1Q9BQI6 1058 aa8.47□□□□□ -1.05
VTI1A-201ENST00000393077 LARSQ9P2J5 1176 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 PPRC1Q5VV67 1664 aaKnown RBP8.47□□□□□ -1.05
VTI1A-201ENST00000393077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.46□□□□□ -1.05
VTI1A-201ENST00000393077 ME3Q16798 604 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 WLSQ5T9L3 541 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 TRIM65Q6PJ69 517 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 VSTM4Q8IW00 320 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 DHX40Q8IX18 779 aaKnown RBP8.46□□□□□ -1.05
VTI1A-201ENST00000393077 DDX12PQ92771 950 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 ANKZF1Q9H8Y5 726 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 STIM2Q9P246 746 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 RAB21Q9UL25 225 aa8.46□□□□□ -1.05
VTI1A-201ENST00000393077 GMNCA6NCL1 334 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 B4DLN1 442 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 TACC1O75410 805 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
VTI1A-201ENST00000393077 EPHB4P54760 987 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 KRT83P78385 493 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 KLC1Q07866 573 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 LONP2Q86WA8 852 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 TAF4BQ92750 862 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 EPAS1Q99814 870 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 KCND1Q9NSA2 647 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 MADDQ8WXG6 1647 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 MSH6P52701 1360 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 PLEKHG1Q9ULL1 1385 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 DIP2CQ9Y2E4 1556 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 PI4KAP2A4QPH2 592 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 ENC1O14682 589 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 SPTLC2O15270 562 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 TMCC1O94876 653 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 FESP07332 822 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 ALDH3A1P30838 453 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 GCLCP48506 637 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-201ENST00000393077 USP14P54578 494 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 ZBTB17Q13105 803 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 PI4KAP1Q8N8J0 262 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.06
VTI1A-201ENST00000393077 MAGEC2Q9UBF1 373 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-201ENST00000393077 CYLC1P35663 651 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 GUCY2FP51841 1108 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 HDLBPQ00341 1268 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 KIF5AQ12840 1032 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TMEM132AQ24JP5 1023 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 CCDC178Q5BJE1 867 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TMEM154Q6P9G4 183 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 DAAM2Q86T65 1068 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 RBM12BQ8IXT5 1001 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 SH2D3CQ8N5H7 860 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 RBM41Q96IZ5 413 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 CTAGE1Q96RT6 745 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 NFE2L3Q9Y4A8 694 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 SYNMO15061 1565 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TLDC2A0PJX2 215 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 ATP4AP20648 1035 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 LCA5Q86VQ0 697 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 APLFQ8IW19 511 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 UBLCP1Q8WVY7 318 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 IP6K1Q92551 441 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 JAKMIP2Q96AA8 810 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 TRAIPQ9BWF2 469 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 L3MBTL1Q9Y468 752 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 CFAP73A6NFT4 308 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 ATP6V1G2O95670 118 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 FAM200BP0CF97 657 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 COG7P83436 770 aa8.45□□□□□ -1.06
VTI1A-201ENST00000393077 IFI16Q16666 785 aaKnown RBP8.45□□□□□ -1.06
VTI1A-201ENST00000393077 ATL3Q6DD88 541 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms