RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PLCG2P16885 1265 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 NFIAQ12857 509 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 WTAPQ15007 396 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 HHIPL2Q6UWX4 724 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 FERMT3Q86UX7 667 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 LLPHQ9BRT6 129 aaKnown RBP21.74■■□□□ 1.07
CCDC50-202ENST00000392456 ORC4O43929 436 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 ZSCAN10Q96SZ4 725 aaPredicted RBP21.74■■□□□ 1.07
CCDC50-202ENST00000392456 UBAC1Q9BSL1 405 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 BCS1LQ9Y276 419 aa21.74■■□□□ 1.07
CCDC50-202ENST00000392456 SLURP2P0DP57 97 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 FAM212AQ96EL1 285 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 C16orf45Q96MC5 204 aaPredicted RBP21.73■■□□□ 1.07
CCDC50-202ENST00000392456 ZBTB12Q9Y330 459 aaPredicted RBP21.73■■□□□ 1.07
CCDC50-202ENST00000392456 FHOD1Q9Y613 1164 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 SLC12A7Q9Y666 1083 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 ZBTB43O43298 467 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 F13A1P00488 732 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
CCDC50-202ENST00000392456 ZFPM1Q8IX07 1006 aa21.73■■□□□ 1.07
CCDC50-202ENST00000392456 RBM28Q9NW13 759 aaKnown RBP21.73■■□□□ 1.07
CCDC50-202ENST00000392456 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 PSMD14O00487 310 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.07
CCDC50-202ENST00000392456 NOM1Q5C9Z4 860 aaKnown RBP21.72■■□□□ 1.07
CCDC50-202ENST00000392456 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 UBE2Q2LH0YL09 131 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 NFKBIEO00221 500 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 PPP1R12AO14974 1030 aaPredicted RBP21.72■■□□□ 1.07
CCDC50-202ENST00000392456 MAGEA9P43362 315 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 PLA2G4AP47712 749 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 FKBP1AP62942 108 aaKnown RBP21.72■■□□□ 1.07
CCDC50-202ENST00000392456 PDE4BQ07343 736 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 E2F4Q16254 413 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 FAM173BQ6P4H8 233 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 ZDHHC15Q96MV8 337 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 GDPD2Q9HCC8 539 aa21.72■■□□□ 1.07
CCDC50-202ENST00000392456 LAMB1P07942 1786 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 FBXO18Q8NFZ0 1043 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 GJB4Q9NTQ9 266 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 ERICH2A1L162 156 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 SLC3A2P08195 630 aaKnown RBP21.71■■□□□ 1.07
CCDC50-202ENST00000392456 LRCH2Q5VUJ6 765 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 NBPF11Q86T75 865 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 CMTR1Q8N1G2 835 aaKnown RBP21.71■■□□□ 1.07
CCDC50-202ENST00000392456 PHKBQ93100 1093 aa21.71■■□□□ 1.07
CCDC50-202ENST00000392456 ZNF215Q9UL58 517 aaPredicted RBP21.71■■□□□ 1.07
CCDC50-202ENST00000392456 NAV1Q8NEY1 1877 aa21.7■■□□□ 1.07
CCDC50-202ENST00000392456 PCP11498 1178 aaKnown RBP21.7■■□□□ 1.06
CCDC50-202ENST00000392456 TFAP4Q01664 338 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 NBPF9Q3BBW0 867 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 MCTP2Q6DN12 878 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 IL17RBQ9NRM6 502 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 TSPY2A6NKD2 308 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 IARSP41252 1262 aaKnown RBP21.7■■□□□ 1.06
CCDC50-202ENST00000392456 GUCY1B3Q02153 619 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 NTRK3Q16288 839 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 SMARCE1Q969G3 411 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 MKNK2Q9HBH9 465 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 BRCA1P38398 1863 aaKnown RBP21.7■■□□□ 1.06
CCDC50-202ENST00000392456 ROBO3Q96MS0 1386 aa21.7■■□□□ 1.06
CCDC50-202ENST00000392456 GOLGA8AA7E2F4 631 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 CPLX1O14810 134 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 PDCP20941 246 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 ELF2Q15723 593 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 OTUD7BQ6GQQ9 843 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 IQCA1Q86XH1 822 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 ZNF654Q8IZM8 581 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 NUP133Q8WUM0 1156 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 CDK8P49336 464 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 PRELPP51888 382 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 TPM4P67936 248 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 PRMT6Q96LA8 375 aaPredicted RBP21.69■■□□□ 1.06
CCDC50-202ENST00000392456 AIFM3Q96NN9 605 aa21.69■■□□□ 1.06
CCDC50-202ENST00000392456 TCHHQ07283 1943 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 VIL1P09327 827 aaKnown RBP21.68■■□□□ 1.06
CCDC50-202ENST00000392456 RASA1P20936 1047 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 RCSD1Q6JBY9 416 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 RSBN1LQ6PCB5 846 aaPredicted RBP21.68■■□□□ 1.06
CCDC50-202ENST00000392456 CCDC82Q8N4S0 544 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 GOLGA5Q8TBA6 731 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 ERO1AQ96HE7 468 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 MTA3Q9BTC8 594 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 MRIQ9BWK5 157 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 TAOK3Q9H2K8 898 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 TCP10Q12799 353 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 IFIT1BQ5T764 474 aaKnown RBP21.68■■□□□ 1.06
CCDC50-202ENST00000392456 SOGA3Q5TF21 947 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 AMOTL1Q8IY63 956 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 GMLQ99445 158 aa21.68■■□□□ 1.06
CCDC50-202ENST00000392456 ORC3Q9UBD5 711 aaPredicted RBP21.68■■□□□ 1.06
CCDC50-202ENST00000392456 DDX60LQ5H9U9 1706 aaKnown RBP21.68■■□□□ 1.06
CCDC50-202ENST00000392456 H2AFXP16104 143 aaPredicted RBP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 C16orf86Q6ZW13 317 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 IQUBQ8NA54 791 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 TDRD3Q9H7E2 651 aaKnown RBP21.67■■□□□ 1.06
CCDC50-202ENST00000392456 SERPINA10Q9UK55 444 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
CCDC50-202ENST00000392456 MYH1P12882 1939 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms