RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 ACRBPQ8NEB7 543 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 NMT2O60551 498 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-205ENST00000392346 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-205ENST00000392346 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 SLC4A4Q9Y6R1 1079 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
CCDC57-205ENST00000392346 GSG1L2A8MUP6 293 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 LRP5O75197 1615 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CAPN15O75808 1086 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 PDE8BO95263 885 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 MYH8P13535 1937 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 RTN1Q16799 776 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CDC5LQ99459 802 aaKnown RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 FAM53CQ9NYF3 392 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 NHSQ6T4R5 1651 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CSF1RP07333 972 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 HMGB2P26583 209 aaKnown RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CASQ1P31415 396 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 KCNQ4P56696 695 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 ZNF174Q15697 407 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 NRDCO43847 1150 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 PPP6R2O75170 966 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 MMP1P03956 469 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 RBL2Q08999 1139 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CEP120Q8N960 986 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 SPATA5Q8NB90 893 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 TSPAN18Q96SJ8 248 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
CCDC57-205ENST00000392346 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-205ENST00000392346 MFSD4BQ5TF39 518 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-205ENST00000392346 PLIN2Q99541 437 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 PARD6BQ9BYG5 372 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 CUTAO60888 179 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.315e-6■■■■■ 41.9
CCDC57-205ENST00000392346 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
CCDC57-205ENST00000392346 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
CCDC57-205ENST00000392346 H3BQF6 201 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 N4BP1O75113 896 aaKnown RBP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 HNRNPH2P55795 449 aaKnown RBP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 WTAPQ15007 396 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 SKIDA1Q1XH10 827 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 PHACTR2O75167 634 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 MCM6Q14566 821 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC57-205ENST00000392346 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 BTAF1O14981 1849 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 PHLPP2Q6ZVD8 1323 aa13.09□□□□□ -0.31
CCDC57-205ENST00000392346 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.31
CCDC57-205ENST00000392346 CDKL5O76039 1030 aa13.08□□□□□ -0.31
CCDC57-205ENST00000392346 ZBTB7AO95365 584 aa13.08□□□□□ -0.31
CCDC57-205ENST00000392346 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.31
CCDC57-205ENST00000392346 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCDC57-205ENST00000392346 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.31
CCDC57-205ENST00000392346 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.31
CCDC57-205ENST00000392346 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.31
CCDC57-205ENST00000392346 VPS16Q9H269 839 aa13.08□□□□□ -0.31
CCDC57-205ENST00000392346 CTNND2Q9UQB3 1225 aa13.08□□□□□ -0.31
CCDC57-205ENST00000392346 COL4A1P02462 1669 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 ZNF18P17022 549 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 CASP14P31944 242 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 GYG1P46976 350 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.32
CCDC57-205ENST00000392346 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
CCDC57-205ENST00000392346 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
CCDC57-205ENST00000392346 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 ERCC3P19447 782 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 PTPREP23469 700 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 TBX2Q13207 712 aaPredicted RBP13.08□□□□□ -0.32
CCDC57-205ENST00000392346 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
CCDC57-205ENST00000392346 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms