RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MLANAQ16655 118 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 SEZ6Q53EL9 994 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 VWCEQ96DN2 955 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 ASPNQ9BXN1 380 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 TRIT1Q9H3H1 467 aaKnown RBP6□□□□□ -1.45
TRAV40-201ENST00000390467 KCNH3Q9ULD8 1083 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 ROBO2Q9HCK4 1378 aa6□□□□□ -1.45
TRAV40-201ENST00000390467 RGS13O14921 159 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 HK2P52789 917 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 CLCQ05315 142 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 PRR23BQ6ZRT6 265 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 SP110Q9HB58 689 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 GPATCH2Q9NW75 528 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 GMIPQ9P107 970 aa5.99□□□□□ -1.45
TRAV40-201ENST00000390467 RBM47A0AV96 593 aaKnown RBP5.98□□□□□ -1.45
TRAV40-201ENST00000390467 BTBD11A6QL63 1104 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 FARP2O94887 1054 aaPredicted RBP5.98□□□□□ -1.45
TRAV40-201ENST00000390467 RAG1P15918 1043 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 LTKP29376 864 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 TRHRP34981 398 aaPredicted RBP5.98□□□□□ -1.45
TRAV40-201ENST00000390467 MFAP1P55081 439 aaKnown RBP5.98□□□□□ -1.45
TRAV40-201ENST00000390467 APOBRQ0VD83 1088 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 GK5Q6ZS86 529 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 ANTXR1Q9H6X2 564 aa5.98□□□□□ -1.45
TRAV40-201ENST00000390467 ZBTB7CA1YPR0 619 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 HPXP02790 462 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 ZGLP1P0C6A0 271 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 GBP1P32455 592 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 TEKQ02763 1124 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 SNW1Q13573 536 aaKnown RBP5.97□□□□□ -1.45
TRAV40-201ENST00000390467 TMEM87AQ8NBN3 555 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 ATG4CQ96DT6 458 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 CCDC120Q96HB5 630 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 EAF1Q96JC9 268 aaPredicted RBP5.97□□□□□ -1.45
TRAV40-201ENST00000390467 BACH2Q9BYV9 841 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 KCNK12Q9HB15 430 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 EBF1Q9UH73 591 aa5.97□□□□□ -1.45
TRAV40-201ENST00000390467 FANCCQ00597 558 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 MLECQ14165 292 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 TIGD5Q53EQ6 642 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 ZNF394Q53GI3 561 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 CDCP2Q5VXM1 449 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 MPZL3Q6UWV2 235 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 TMC3Q7Z5M5 1100 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 KIAA0825Q8IV33 1275 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 ZNF512BQ96KM6 892 aaPredicted RBP5.96□□□□□ -1.46
TRAV40-201ENST00000390467 NT5C1AQ9BXI3 368 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 HDAC8Q9BY41 377 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 PCDHGB7Q9Y5F8 929 aa5.96□□□□□ -1.46
TRAV40-201ENST00000390467 RAC2P15153 192 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 ZNF76P36508 570 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
TRAV40-201ENST00000390467 FZD5Q13467 585 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 NBPF12Q5TAG4 269 aaPredicted RBP5.95□□□□□ -1.46
TRAV40-201ENST00000390467 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 SLITRK4Q8IW52 837 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 REXO1Q8N1G1 1221 aaKnown RBP5.95□□□□□ -1.46
TRAV40-201ENST00000390467 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 MYLIPQ8WY64 445 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 SPON2Q9BUD6 331 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 RNF32Q9H0A6 362 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 NSUN3Q9H649 340 aaKnown RBP5.95□□□□□ -1.46
TRAV40-201ENST00000390467 C19orf44Q9H6X5 657 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 FAM53CQ9NYF3 392 aa5.95□□□□□ -1.46
TRAV40-201ENST00000390467 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
TRAV40-201ENST00000390467 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 MEIS3P2A8K0S8 358 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 RECKO95980 971 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 MCM4P33991 863 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 RNF4P78317 190 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 USP48Q86UV5 1035 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 CILP2Q8IUL8 1156 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 NKD1Q969G9 470 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 FAM84AQ96KN4 292 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 G6PC3Q9BUM1 346 aa5.94□□□□□ -1.46
TRAV40-201ENST00000390467 EFEMP2O95967 443 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 NME1P15531 152 aaKnown RBP5.93□□□□□ -1.46
TRAV40-201ENST00000390467 ZNF165P49910 485 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 CLEC16AQ2KHT3 1053 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 NBPF9Q3BBW0 867 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 TMEM192Q8IY95 271 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 PDZD8Q8NEN9 1154 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.93□□□□□ -1.46
TRAV40-201ENST00000390467 BCL11AQ9H165 835 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 MINPP1Q9UNW1 487 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 ZNF281Q9Y2X9 895 aa5.93□□□□□ -1.46
TRAV40-201ENST00000390467 TNFRSF10CO14798 259 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 KRT1P04264 644 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 CHMP4BP1P59074 171 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 PKN1Q16512 942 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 BBS9Q3SYG4 887 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 SYTL5Q8TDW5 730 aaPredicted RBP5.92□□□□□ -1.46
TRAV40-201ENST00000390467 TCTN2Q96GX1 697 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 SLC9A7Q96T83 725 aa5.92□□□□□ -1.46
TRAV40-201ENST00000390467 SLC38A3Q99624 504 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms