RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 MMS19Q96T76 1030 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 RHOXF2Q9BQY4 288 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 CARD10Q9BWT7 1032 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 FAM107BQ9H098 131 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 LZTFL1Q9NQ48 299 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 PAG1Q9NWQ8 432 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 TRIM10Q9UDY6 481 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 LIMA1Q9UHB6 759 aaKnown RBP3.91□□□□□ -1.78
TRAV39-201ENST00000390466 SERTAD1Q9UHV2 236 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 GGA2Q9UJY4 613 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 KCNH3Q9ULD8 1083 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 WWC3Q9ULE0 1092 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 MYO6Q9UM54 1294 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 HDAC5Q9UQL6 1122 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 XDHP47989 1333 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 SYNRGQ9UMZ2 1314 aa3.91□□□□□ -1.78
TRAV39-201ENST00000390466 TNRC6CQ9HCJ0 1690 aaKnown RBP3.9□□□□□ -1.78
TRAV39-201ENST00000390466 TAF1P21675 1872 aa3.9□□□□□ -1.78
TRAV39-201ENST00000390466 BTBD11A6QL63 1104 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 H7C1W4 665 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 GOLIM4O00461 696 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 RNF113AO15541 343 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 KIF5CO60282 957 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TOM1O60784 492 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 PHACTR2O75167 634 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 FGAP02671 866 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 A1BGP04217 495 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 MYBP10242 640 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CASP14P31944 242 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ATP6V1AP38606 617 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TNNT3P45378 269 aaPredicted RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 COPB1P53618 953 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CTDSPL2Q05D32 466 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 SCARF1Q14162 830 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 KRT31Q15323 416 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 NPY5RQ15761 445 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 EZH2Q15910 746 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 KIF4BQ2VIQ3 1234 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 MAP9Q49MG5 647 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 HSP90AA4PQ58FG1 418 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TTC39AQ5SRH9 613 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 HAUS3Q68CZ6 603 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CCDC102BQ68D86 513 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CCNI2Q6ZMN8 369 aaPredicted RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 GBP6Q6ZN66 633 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 EP400NLQ6ZTU2 488 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 YTHDF3Q7Z739 585 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 SGMS1Q86VZ5 419 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 RAB11FIP4Q86YS3 637 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TMTC1Q8IUR5 882 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 MREGQ8N565 214 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 KRI1Q8N9T8 703 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 C1orf131Q8NDD1 294 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 IGDCC4Q8TDY8 1250 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 XAGE3Q8WTP9 111 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 PIK3R5Q8WYR1 880 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TNFRSF25Q93038 417 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CAVIN3Q969G5 261 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ZNF622Q969S3 477 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ARL8AQ96BM9 186 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 DNAJC7Q99615 494 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 CHP1Q99653 195 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 MTRQ99707 1265 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TACO1Q9BSH4 297 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ALG1Q9BT22 464 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 VCPKMTQ9H867 229 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 STRN4Q9NRL3 753 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ABHD10Q9NUJ1 306 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 GNL3LQ9NVN8 582 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 AATFQ9NY61 560 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 HDAC6Q9UBN7 1215 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 DMGDHQ9UI17 866 aaKnown RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 KCNG1Q9UIX4 513 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 TAOK2Q9UL54 1235 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 COL1A1P02452 1464 aaPredicted RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 FOCADQ5VW36 1801 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 NHSQ6T4R5 1651 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 SOS2Q07890 1332 aaPredicted RBP3.9□□□□□ -1.79
TRAV39-201ENST00000390466 NAV1Q8NEY1 1877 aa3.9□□□□□ -1.79
TRAV39-201ENST00000390466 ANO9A1A5B4 782 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 GOLGA6CA6NDK9 693 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FAM205CA6NFA0 338 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 C5orf60A6NFR6 353 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MYO1FO00160 1098 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CLGNO14967 610 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ZNF263O14978 683 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 CIAO1O76071 339 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NDUFA10O95299 355 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 FMNL1O95466 1100 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 MMP1P03956 469 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 GOLGA6DP0CG33 693 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ZBTB48P10074 688 aaPredicted RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ADORA1P30542 326 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 ELF1P32519 619 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 SMTNP53814 917 aa3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NAP1L1P55209 391 aaKnown RBP3.89□□□□□ -1.79
TRAV39-201ENST00000390466 NLRP6P59044 892 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms