RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 GRM4Q14833 912 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 CERKLQ49MI3 558 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 FOXP4Q8IVH2 680 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 SHISA4Q96DD7 197 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 RNF26Q9BY78 433 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 CLIP2Q9UDT6 1046 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 CNOT7Q9UIV1 285 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 PRPF3O43395 683 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 MYO1BO43795 1136 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 TOP1P11387 765 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 VEGFAP15692 232 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 LMNB1P20700 586 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 KIF5BP33176 963 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 NOVP48745 357 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 ZNF280AP59817 542 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 JAG1P78504 1218 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 AKAP17AQ02040 695 aaKnown RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 KIF23Q02241 960 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 SLC35G1Q2M3R5 365 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 SKOR2Q2VWA4 1001 aaPredicted RBP14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 FAM151AQ8WW52 585 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 TRIM29Q14134 588 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 TATDN1Q6P1N9 297 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 WASF1Q92558 559 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 VPS54Q9P1Q0 977 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 MIGA2Q7L4E1 593 aa14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 RBM27Q9P2N5 1060 aaKnown RBP14.12□□□□□ -0.15
SPTBN1-203ENST00000389980 TTLL1O95922 423 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 SEPT2Q15019 361 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 DPF2Q92785 391 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 CCDC17Q96LX7 622 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 USP28Q96RU2 1077 aa14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.11□□□□□ -0.152e-6■■■■□ 20.7
SPTBN1-203ENST00000389980 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
SPTBN1-203ENST00000389980 PALM3A6NDB9 673 aaPredicted RBP14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 CYTH3O43739 400 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 LEO1Q8WVC0 666 aaPredicted RBP14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 FRMPD2Q68DX3 1309 aaPredicted RBP14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 KLRF2D3W0D1 207 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 MMP1P03956 469 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 PARP1P09874 1014 aaKnown RBP14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 ABCB5Q2M3G0 1257 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 FKBP1CQ5VVH2 108 aa14.1□□□□□ -0.15
SPTBN1-203ENST00000389980 RAD21O60216 631 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 GH2P01242 217 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 PDHBP11177 359 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 EEF2P13639 858 aaKnown RBP14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 RASA3Q14644 834 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 OXER1Q8TDS5 423 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 UBA5Q9GZZ9 404 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 PGAP2Q9UHJ9 254 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 NR5A1Q13285 461 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 KIF4BQ2VIQ3 1234 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 SCAND2PQ9GZW5 306 aaPredicted RBP14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 HACL1Q9UJ83 578 aa14.09□□□□□ -0.15
SPTBN1-203ENST00000389980 SCG2P13521 617 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 TRPM4Q8TD43 1214 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 HERC5Q9UII4 1024 aaKnown RBP14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 CFAP45Q9UL16 551 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 CLIC4Q9Y696 253 aa14.08□□□□□ -0.16
SPTBN1-203ENST00000389980 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 DDNO94850 711 aaPredicted RBP14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.162e-7■■■□□ 17.6
SPTBN1-203ENST00000389980 EPS15P42566 896 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 GNAQP50148 359 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 UBE2HP62256 183 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 ICA1Q05084 483 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 PFKFB3Q16875 520 aaPredicted RBP14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 TMEM179Q6ZVK1 233 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 KANSL2Q9H9L4 492 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 POLR2AP24928 1970 aaKnown RBP14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 H7C1D1 291 aa14.07□□□□□ -0.16
SPTBN1-203ENST00000389980 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms