RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 JAG1P78504 1218 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 ARSHQ5FYA8 562 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 SLC23A3Q6PIS1 610 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 ZNF574Q6ZN55 896 aaPredicted RBP3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 GK5Q6ZS86 529 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 ARHGAP27Q6ZUM4 889 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 XAGE3Q8WTP9 111 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 SEC16BQ96JE7 1060 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 HSPA12BQ96MM6 686 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 KREMEN1Q96MU8 473 aa3.94□□□□□ -1.78
RNU6-541P-201ENST00000384709 ACRP10323 421 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 TCF3P15923 654 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 NBPF12Q5TAG4 269 aaPredicted RBP3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 ANGEL2Q5VTE6 544 aaKnown RBP3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 TMPRSS7Q7RTY8 843 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 ENOX1Q8TC92 643 aaKnown RBP3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 GPRASP2Q96D09 838 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 KIF2CQ99661 725 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 GINM1Q9NU53 330 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 PODXL2Q9NZ53 605 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 PRR13Q9NZ81 148 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 KLHL3Q9UH77 587 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 KCNH3Q9ULD8 1083 aa3.93□□□□□ -1.78
RNU6-541P-201ENST00000384709 RBAK-RBAKDNI3L0D1 243 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 ESR1P03372 595 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 RNASE1P07998 156 aaKnown RBP3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 RAG1P15918 1043 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 ITIH2P19823 946 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 GIPRP48546 466 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 RNF4P78317 190 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 ANKRD39Q53RE8 183 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 TSPYL5Q86VY4 417 aaPredicted RBP3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 TP53INP2Q8IXH6 220 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 C19orf47Q8N9M1 422 aaKnown RBP3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 OR6P1Q8NGX9 317 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 ZNF428Q96B54 188 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 TM9SF2Q99805 663 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 TRIT1Q9H3H1 467 aaKnown RBP3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 ANTXR1Q9H6X2 564 aa3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 MBNL3Q9NUK0 354 aaKnown RBP3.92□□□□□ -1.78
RNU6-541P-201ENST00000384709 FAM155AB1AL88 458 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 H3BS24 57 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 CBX7O95931 251 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 JUNBP17275 347 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 GBP1P32455 592 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 MCM4P33991 863 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 IRAK1P51617 712 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 CASP7P55210 303 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 NBPF9Q3BBW0 867 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 ZNF792Q3KQV3 632 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 C9orf131Q5VYM1 1079 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 ATG4DQ86TL0 474 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 LSRQ86X29 649 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 TMEM192Q8IY95 271 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 PHACTR4Q8IZ21 702 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 FLAD1Q8NFF5 587 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 SMARCC1Q92922 1105 aaPredicted RBP3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 SHDQ96IW2 340 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 SLC9A7Q96T83 725 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 ACBD3Q9H3P7 528 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 ADAMTS6Q9UKP5 1117 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 STRIP2Q9ULQ0 834 aa3.91□□□□□ -1.78
RNU6-541P-201ENST00000384709 LRRN2O75325 713 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 ATF4P18848 351 aaPredicted RBP3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 POLR2BP30876 1174 aaKnown RBP3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 CD96P40200 585 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 ZP2Q05996 745 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 PLCL1Q15111 1095 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 CDKAL1Q5VV42 579 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 SLC43A3Q8NBI5 491 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 DAGLBQ8NCG7 672 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 SYTL5Q8TDW5 730 aaPredicted RBP3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 UBE2FQ969M7 185 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 GMLQ99445 158 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 SRRTQ9BXP5 876 aaKnown RBP3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 HDAC8Q9BY41 377 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 ATP13A1Q9HD20 1204 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 C19orf73Q9NVV2 129 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 SUCOQ9UBS9 1254 aaKnown RBP3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 EFR3BQ9Y2G0 817 aa3.9□□□□□ -1.79
RNU6-541P-201ENST00000384709 CLEC3AO75596 197 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 PAPLNO95428 1278 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 GUCY2CP25092 1073 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 TPP2P29144 1249 aaPredicted RBP3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 GDNFP39905 211 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 PMS1P54277 932 aaKnown RBP3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 IKZF1Q13422 519 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 LRRN4CLQ8ND94 238 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 PI4K2BQ8TCG2 481 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 DHRS1Q96LJ7 313 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 FERD3LQ96RJ6 166 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 TINF2Q9BSI4 451 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 SP110Q9HB58 689 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 GPATCH2Q9NW75 528 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 ZSWIM5Q9P217 1185 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 PPT2Q9UMR5 302 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 CTNND2Q9UQB3 1225 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 SLC12A7Q9Y666 1083 aa3.89□□□□□ -1.79
RNU6-541P-201ENST00000384709 SHISA3A0PJX4 238 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms