RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CALM1P0DP23 149 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 CALM2P0DP24 149 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 CALM3P0DP25 149 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 STX17P56962 302 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
BEST1-201ENST00000378043 MTF1Q14872 753 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 SPATA1Q5VX52 437 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 ZHX1Q9UKY1 873 aaPredicted RBP12.45□□□□□ -0.42
BEST1-201ENST00000378043 TADA3O75528 432 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 CYP2D6P10635 497 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 PBX1P40424 430 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 CLCN6P51797 869 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 E2F4Q16254 413 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 IL17AQ16552 155 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 BICDL1Q6ZP65 573 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 STAMQ92783 540 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 GSDMAQ96QA5 445 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 MTRQ99707 1265 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 XDHP47989 1333 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 PRDX5P30044 214 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 CT47A1Q5JQC4 288 aaPredicted RBP12.44□□□□□ -0.42
BEST1-201ENST00000378043 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 RCSD1Q6JBY9 416 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 ADD3Q9UEY8 706 aaKnown RBP12.44□□□□□ -0.42
BEST1-201ENST00000378043 MYH8P13535 1937 aa12.44□□□□□ -0.42
BEST1-201ENST00000378043 GOLGB1Q14789 3259 aaKnown RBP12.43□□□□□ -0.42
BEST1-201ENST00000378043 BMP15O95972 392 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 KRT222Q8N1A0 295 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 KIFC2Q96AC6 838 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 SYNRGQ9UMZ2 1314 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 CCDC88AQ3V6T2 1871 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
BEST1-201ENST00000378043 MRPL44Q9H9J2 332 aaKnown RBP12.43□□□□□ -0.42
BEST1-201ENST00000378043 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 SEMA3EO15041 775 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 SCG2P13521 617 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 GNG11P61952 73 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
BEST1-201ENST00000378043 RBL2Q08999 1139 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 PIK3AP1Q6ZUJ8 805 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
BEST1-201ENST00000378043 SMARCC1Q92922 1105 aaPredicted RBP12.42□□□□□ -0.42
BEST1-201ENST00000378043 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
BEST1-201ENST00000378043 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
BEST1-201ENST00000378043 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 COBLO75128 1261 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 UBXN4Q92575 508 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 PANX2Q96RD6 677 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
BEST1-201ENST00000378043 A0A0U1RQJ8 604 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 GOLGA6L9A6NEM1 432 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 GABPB1Q06547 395 aaPredicted RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 ATRIPQ8WXE1 791 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 CCDC34Q96HJ3 373 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 ST7Q9NRC1 585 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 ATP8A2Q9NTI2 1148 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 ZRANB2O95218 330 aaKnown RBP eCLIP12.41□□□□□ -0.42
BEST1-201ENST00000378043 HIBADHP31937 336 aaKnown RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 MCM7P33993 719 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 NLRP5P59047 1200 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 MNS1Q8NEH6 495 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
BEST1-201ENST00000378043 EPC1Q9H2F5 836 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
BEST1-201ENST00000378043 FAM205AQ6ZU69 1335 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
BEST1-201ENST00000378043 CASQ1P31415 396 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 KARSQ15046 597 aaKnown RBP12.4□□□□□ -0.42
BEST1-201ENST00000378043 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 CPLX3Q8WVH0 158 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 MRFAP1Q9Y605 127 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 GYPCP04921 128 aa12.4□□□□□ -0.42
BEST1-201ENST00000378043 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms